Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB28P51157 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB28P51157 OR2R1P-201ENST00000441404 914 ntBASIC14.03□□□□□ -0.16
RAB28P51157 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB28P51157 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB28P51157 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB28P51157 AC103810.3-201ENST00000583567 96 ntBASIC14.03□□□□□ -0.16
RAB28P51157 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 AL645939.5-201ENST00000606834 243 ntBASIC14.03□□□□□ -0.16
RAB28P51157 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB28P51157 AC100757.4-201ENST00000626934 759 ntBASIC14.03□□□□□ -0.16
RAB28P51157 AC092299.1-201ENST00000632679 757 ntBASIC14.03□□□□□ -0.16
RAB28P51157 AL805961.1-203ENST00000641078 1258 ntBASIC14.03□□□□□ -0.16
RAB28P51157 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB28P51157 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB28P51157 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RAB28P51157 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB28P51157 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB28P51157 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB28P51157 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB28P51157 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB28P51157 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB28P51157 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB28P51157 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB28P51157 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB28P51157 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RAB28P51157 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.02□□□□□ -0.16
RAB28P51157 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RAB28P51157 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RAB28P51157 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.02□□□□□ -0.16
RAB28P51157 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RAB28P51157 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB28P51157 RN7SKP214-201ENST00000364208 315 ntBASIC14.02□□□□□ -0.17
RAB28P51157 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RAB28P51157 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
RAB28P51157 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB28P51157 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB28P51157 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB28P51157 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB28P51157 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB28P51157 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB28P51157 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.02□□□□□ -0.17
RAB28P51157 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RAB28P51157 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
RAB28P51157 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RAB28P51157 AL591471.1-201ENST00000621855 229 ntBASIC14.02□□□□□ -0.17
RAB28P51157 AC090386.2-201ENST00000623010 1039 ntBASIC14.02□□□□□ -0.17
RAB28P51157 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB28P51157 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RAB28P51157 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB28P51157 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB28P51157 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.02□□□□□ -0.17
RAB28P51157 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 AC012617.1-204ENST00000586340 2305 ntBASIC14.02□□□□□ -0.17
RAB28P51157 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB28P51157 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RAB28P51157 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB28P51157 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 AL133338.1-201ENST00000565695 1517 ntBASIC14.01□□□□□ -0.17
RAB28P51157 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RAB28P51157 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB28P51157 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
RAB28P51157 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB28P51157 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
RAB28P51157 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB28P51157 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms