Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
SRP9P49458 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SRP9P49458 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SRP9P49458 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SRP9P49458 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.01□□□□□ -0.33
SRP9P49458 AL512384.1-201ENST00000406683 331 ntBASIC13.01□□□□□ -0.33
SRP9P49458 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
SRP9P49458 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 AC114812.1-204ENST00000449669 728 ntBASIC13.01□□□□□ -0.33
SRP9P49458 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 PTP4A1P2-201ENST00000546033 454 ntBASIC13.01□□□□□ -0.33
SRP9P49458 CR383656.12-201ENST00000549567 513 ntBASIC13.01□□□□□ -0.33
SRP9P49458 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.01□□□□□ -0.33
SRP9P49458 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.01□□□□□ -0.33
SRP9P49458 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.01□□□□□ -0.33
SRP9P49458 AC012645.4-201ENST00000610691 1061 ntBASIC13.01□□□□□ -0.33
SRP9P49458 AP005019.2-201ENST00000615104 511 ntBASIC13.01□□□□□ -0.33
SRP9P49458 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SRP9P49458 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.01□□□□□ -0.33
SRP9P49458 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
SRP9P49458 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SRP9P49458 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.01□□□□□ -0.33
SRP9P49458 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.01□□□□□ -0.33
SRP9P49458 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SRP9P49458 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13□□□□□ -0.33
SRP9P49458 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13□□□□□ -0.33
SRP9P49458 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13□□□□□ -0.33
SRP9P49458 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13□□□□□ -0.33
SRP9P49458 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SRP9P49458 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SRP9P49458 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SRP9P49458 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SRP9P49458 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SRP9P49458 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13□□□□□ -0.33
SRP9P49458 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13□□□□□ -0.33
SRP9P49458 NME2P1-201ENST00000426182 414 ntBASIC13□□□□□ -0.33
SRP9P49458 INE1-201ENST00000456273 945 ntBASIC13□□□□□ -0.33
SRP9P49458 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13□□□□□ -0.33
SRP9P49458 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
SRP9P49458 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13□□□□□ -0.33
SRP9P49458 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13□□□□□ -0.33
SRP9P49458 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms