Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 AL009178.2-201ENST00000597278 2719 ntBASIC15.65■□□□□ 0.1
TNFSF9P41273 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFSF9P41273 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.65■□□□□ 0.1
TNFSF9P41273 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFSF9P41273 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFSF9P41273 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFSF9P41273 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TNFSF9P41273 AL161670.2-201ENST00000557650 1227 ntBASIC15.65■□□□□ 0.1
TNFSF9P41273 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC15.65■□□□□ 0.1
TNFSF9P41273 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFSF9P41273 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.65■□□□□ 0.1
TNFSF9P41273 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TNFSF9P41273 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TNFSF9P41273 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 SNX18-202ENST00000343017 3140 ntBASIC15.65■□□□□ 0.1
TNFSF9P41273 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.65■□□□□ 0.1
TNFSF9P41273 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TNFSF9P41273 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.64■□□□□ 0.1
TNFSF9P41273 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TNFSF9P41273 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TNFSF9P41273 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 AC068418.2-201ENST00000577309 3703 ntBASIC15.64■□□□□ 0.09
TNFSF9P41273 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.64■□□□□ 0.09
TNFSF9P41273 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TNFSF9P41273 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 AC152010.1-201ENST00000415779 2006 ntBASIC15.64■□□□□ 0.09
TNFSF9P41273 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.64■□□□□ 0.09
TNFSF9P41273 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.64■□□□□ 0.09
TNFSF9P41273 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.64■□□□□ 0.09
TNFSF9P41273 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.64■□□□□ 0.09
TNFSF9P41273 RN7SL277P-201ENST00000481521 288 ntBASIC15.64■□□□□ 0.09
TNFSF9P41273 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.64■□□□□ 0.09
TNFSF9P41273 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.64■□□□□ 0.09
TNFSF9P41273 MIR3188-201ENST00000583494 85 ntBASIC15.64■□□□□ 0.09
TNFSF9P41273 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.64■□□□□ 0.09
TNFSF9P41273 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.64■□□□□ 0.09
TNFSF9P41273 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TNFSF9P41273 AC027601.5-201ENST00000624065 2482 ntBASIC15.64■□□□□ 0.09
TNFSF9P41273 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.64■□□□□ 0.09
TNFSF9P41273 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.64■□□□□ 0.09
TNFSF9P41273 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TNFSF9P41273 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
TNFSF9P41273 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.64■□□□□ 0.09
TNFSF9P41273 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.64■□□□□ 0.09
TNFSF9P41273 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
TNFSF9P41273 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.64■□□□□ 0.09
TNFSF9P41273 AC020910.6-201ENST00000623084 1459 ntBASIC15.64■□□□□ 0.09
TNFSF9P41273 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TNFSF9P41273 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.64■□□□□ 0.09
TNFSF9P41273 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TNFSF9P41273 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.63■□□□□ 0.09
TNFSF9P41273 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.63■□□□□ 0.09
TNFSF9P41273 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.63■□□□□ 0.09
TNFSF9P41273 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TNFSF9P41273 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TNFSF9P41273 AL662890.1-201ENST00000396818 632 ntBASIC15.63■□□□□ 0.09
TNFSF9P41273 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.63■□□□□ 0.09
TNFSF9P41273 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms