Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CSTP2-201ENST00000610599 398 ntBASIC16.85■□□□□ 0.29
COL4A5P29400 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 AC026120.2-201ENST00000617239 309 ntBASIC16.85■□□□□ 0.29
COL4A5P29400 RN7SL832P-201ENST00000607781 1756 ntBASIC16.85■□□□□ 0.29
COL4A5P29400 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL4A5P29400 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
COL4A5P29400 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A5P29400 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A5P29400 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.85■□□□□ 0.29
COL4A5P29400 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 AL139158.3-201ENST00000641212 1562 ntBASIC16.85■□□□□ 0.29
COL4A5P29400 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 U73169.1-201ENST00000395152 367 ntBASIC16.85■□□□□ 0.29
COL4A5P29400 PHBP10-201ENST00000416467 784 ntBASIC16.85■□□□□ 0.29
COL4A5P29400 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC16.85■□□□□ 0.29
COL4A5P29400 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.85■□□□□ 0.29
COL4A5P29400 AC010900.1-201ENST00000449849 1296 ntBASIC16.85■□□□□ 0.29
COL4A5P29400 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
COL4A5P29400 AC004923.3-201ENST00000527532 355 ntBASIC16.85■□□□□ 0.29
COL4A5P29400 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC16.85■□□□□ 0.29
COL4A5P29400 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC16.85■□□□□ 0.29
COL4A5P29400 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL4A5P29400 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.85■□□□□ 0.29
COL4A5P29400 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.84■□□□□ 0.29
COL4A5P29400 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.84■□□□□ 0.29
COL4A5P29400 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COL4A5P29400 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
COL4A5P29400 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
COL4A5P29400 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.84■□□□□ 0.29
COL4A5P29400 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
COL4A5P29400 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.84■□□□□ 0.29
COL4A5P29400 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.84■□□□□ 0.29
COL4A5P29400 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
COL4A5P29400 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 AHCYP3-201ENST00000420053 1279 ntBASIC16.84■□□□□ 0.29
COL4A5P29400 AC006328.1-201ENST00000437571 379 ntBASIC16.84■□□□□ 0.29
COL4A5P29400 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.84■□□□□ 0.29
COL4A5P29400 RN7SL578P-201ENST00000477781 283 ntBASIC16.84■□□□□ 0.29
COL4A5P29400 COQ10BP2-201ENST00000513804 724 ntBASIC16.84■□□□□ 0.29
COL4A5P29400 RNA5SP420-201ENST00000516997 137 ntBASIC16.84■□□□□ 0.29
COL4A5P29400 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC16.84■□□□□ 0.29
COL4A5P29400 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.84■□□□□ 0.29
COL4A5P29400 AC004801.1-201ENST00000549557 360 ntBASIC16.84■□□□□ 0.29
COL4A5P29400 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC16.84■□□□□ 0.29
COL4A5P29400 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC16.84■□□□□ 0.29
COL4A5P29400 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.84■□□□□ 0.29
COL4A5P29400 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC16.84■□□□□ 0.29
COL4A5P29400 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL4A5P29400 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL4A5P29400 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.83■□□□□ 0.29
COL4A5P29400 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL4A5P29400 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL4A5P29400 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.83■□□□□ 0.29
COL4A5P29400 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
COL4A5P29400 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
COL4A5P29400 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
COL4A5P29400 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.83■□□□□ 0.29
COL4A5P29400 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL4A5P29400 AC105917.1-201ENST00000506637 2539 ntBASIC16.83■□□□□ 0.28
COL4A5P29400 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL4A5P29400 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL4A5P29400 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL4A5P29400 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
COL4A5P29400 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL4A5P29400 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL4A5P29400 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms