Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VARSP26640 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
VARSP26640 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.46□□□□□ -0.09
VARSP26640 AC089987.1-201ENST00000551654 2209 ntBASIC14.46□□□□□ -0.1
VARSP26640 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
VARSP26640 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VARSP26640 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VARSP26640 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VARSP26640 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VARSP26640 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VARSP26640 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VARSP26640 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
VARSP26640 AC040160.2-201ENST00000623816 1675 ntBASIC14.46□□□□□ -0.1
VARSP26640 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
VARSP26640 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VARSP26640 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.45□□□□□ -0.1
VARSP26640 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 SALL4P5-201ENST00000419001 1760 ntBASIC14.45□□□□□ -0.1
VARSP26640 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.45□□□□□ -0.1
VARSP26640 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VARSP26640 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.45□□□□□ -0.1
VARSP26640 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 CSF2RBP1-201ENST00000447905 391 ntBASIC14.45□□□□□ -0.1
VARSP26640 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.45□□□□□ -0.1
VARSP26640 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 GNRHR2-203ENST00000581100 1187 ntBASIC14.45□□□□□ -0.1
VARSP26640 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VARSP26640 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.45□□□□□ -0.1
VARSP26640 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VARSP26640 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VARSP26640 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.45□□□□□ -0.1
VARSP26640 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
VARSP26640 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.45□□□□□ -0.1
VARSP26640 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VARSP26640 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.44□□□□□ -0.1
VARSP26640 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.44□□□□□ -0.1
VARSP26640 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 AC003102.2-201ENST00000589195 1469 ntBASIC14.44□□□□□ -0.1
VARSP26640 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 CLUHP2-201ENST00000426660 1303 ntBASIC14.44□□□□□ -0.1
VARSP26640 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VARSP26640 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.44□□□□□ -0.1
VARSP26640 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 ST20-AS1-201ENST00000560255 4223 ntBASIC14.44□□□□□ -0.1
VARSP26640 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.44□□□□□ -0.1
VARSP26640 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.44□□□□□ -0.1
VARSP26640 ANKRD19P-201ENST00000338192 862 ntBASIC14.44□□□□□ -0.1
VARSP26640 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.44□□□□□ -0.1
VARSP26640 AC007969.1-201ENST00000433675 447 ntBASIC14.44□□□□□ -0.1
VARSP26640 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.44□□□□□ -0.1
VARSP26640 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
VARSP26640 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC14.44□□□□□ -0.1
VARSP26640 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
VARSP26640 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.44□□□□□ -0.1
VARSP26640 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC14.44□□□□□ -0.1
VARSP26640 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
VARSP26640 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
VARSP26640 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.44□□□□□ -0.1
VARSP26640 AP000812.2-201ENST00000538934 718 ntBASIC14.44□□□□□ -0.1
VARSP26640 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.44□□□□□ -0.1
VARSP26640 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VARSP26640 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.44□□□□□ -0.1
VARSP26640 ENPP7P14-201ENST00000621765 1040 ntBASIC14.44□□□□□ -0.1
VARSP26640 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms