Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.84□□□□□ -0.19
CCNA2P20248 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.84□□□□□ -0.19
CCNA2P20248 TMEM261P1-201ENST00000604899 340 ntBASIC13.84□□□□□ -0.19
CCNA2P20248 WFDC1-204ENST00000613603 549 ntBASIC13.84□□□□□ -0.19
CCNA2P20248 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCNA2P20248 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCNA2P20248 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCNA2P20248 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.84□□□□□ -0.19
CCNA2P20248 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CCNA2P20248 INE2-201ENST00000630399 1874 ntBASIC13.84□□□□□ -0.19
CCNA2P20248 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CCNA2P20248 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCNA2P20248 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.84□□□□□ -0.19
CCNA2P20248 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCNA2P20248 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCNA2P20248 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CCNA2P20248 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CCNA2P20248 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCNA2P20248 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CCNA2P20248 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCNA2P20248 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 AL137783.1-201ENST00000623494 1896 ntBASIC13.83□□□□□ -0.2
CCNA2P20248 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.83□□□□□ -0.2
CCNA2P20248 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CCNA2P20248 AL442647.2-201ENST00000429864 857 ntBASIC13.83□□□□□ -0.2
CCNA2P20248 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 AC124283.3-201ENST00000570869 594 ntBASIC13.83□□□□□ -0.2
CCNA2P20248 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 AC138761.1-201ENST00000584393 385 ntBASIC13.83□□□□□ -0.2
CCNA2P20248 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 CU634019.7-201ENST00000624153 1185 ntBASIC13.83□□□□□ -0.2
CCNA2P20248 FP236241.2-201ENST00000624906 1185 ntBASIC13.83□□□□□ -0.2
CCNA2P20248 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CCNA2P20248 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.83□□□□□ -0.2
CCNA2P20248 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.83□□□□□ -0.2
CCNA2P20248 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.83□□□□□ -0.2
CCNA2P20248 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 AC093525.8-201ENST00000624099 1342 ntBASIC13.83□□□□□ -0.2
CCNA2P20248 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CCNA2P20248 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCNA2P20248 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
CCNA2P20248 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.83□□□□□ -0.2
CCNA2P20248 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
CCNA2P20248 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.82□□□□□ -0.2
CCNA2P20248 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCNA2P20248 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCNA2P20248 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCNA2P20248 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCNA2P20248 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCNA2P20248 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.82□□□□□ -0.2
CCNA2P20248 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.82□□□□□ -0.2
CCNA2P20248 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCNA2P20248 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCNA2P20248 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCNA2P20248 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCNA2P20248 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.82□□□□□ -0.2
CCNA2P20248 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCNA2P20248 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCNA2P20248 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms