Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.84□□□□□ -0.35
ATF1P18846 AC131212.3-201ENST00000624087 4219 ntBASIC12.84□□□□□ -0.35
ATF1P18846 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 AC003102.2-201ENST00000589195 1469 ntBASIC12.84□□□□□ -0.35
ATF1P18846 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ATF1P18846 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ATF1P18846 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ATF1P18846 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ATF1P18846 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.83□□□□□ -0.35
ATF1P18846 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.83□□□□□ -0.35
ATF1P18846 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ATF1P18846 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
ATF1P18846 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
ATF1P18846 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.35
ATF1P18846 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.83□□□□□ -0.36
ATF1P18846 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.83□□□□□ -0.36
ATF1P18846 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ATF1P18846 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.83□□□□□ -0.36
ATF1P18846 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ATF1P18846 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.83□□□□□ -0.36
ATF1P18846 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ATF1P18846 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
ATF1P18846 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.83□□□□□ -0.36
ATF1P18846 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.83□□□□□ -0.36
ATF1P18846 INGX-202ENST00000489074 768 ntBASIC12.83□□□□□ -0.36
ATF1P18846 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.83□□□□□ -0.36
ATF1P18846 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.83□□□□□ -0.36
ATF1P18846 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.83□□□□□ -0.36
ATF1P18846 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.83□□□□□ -0.36
ATF1P18846 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.83□□□□□ -0.36
ATF1P18846 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.83□□□□□ -0.36
ATF1P18846 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 TMEM261P1-201ENST00000604899 340 ntBASIC12.83□□□□□ -0.36
ATF1P18846 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
ATF1P18846 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ATF1P18846 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
ATF1P18846 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
ATF1P18846 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ATF1P18846 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.83□□□□□ -0.36
ATF1P18846 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.83□□□□□ -0.36
ATF1P18846 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ATF1P18846 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.82□□□□□ -0.36
ATF1P18846 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.82□□□□□ -0.36
ATF1P18846 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.82□□□□□ -0.36
ATF1P18846 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
ATF1P18846 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.82□□□□□ -0.36
ATF1P18846 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ATF1P18846 ACTBP8-201ENST00000403258 1108 ntBASIC12.82□□□□□ -0.36
ATF1P18846 AC098850.1-201ENST00000419919 790 ntBASIC12.82□□□□□ -0.36
ATF1P18846 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.82□□□□□ -0.36
ATF1P18846 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.82□□□□□ -0.36
ATF1P18846 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.82□□□□□ -0.36
ATF1P18846 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.82□□□□□ -0.36
ATF1P18846 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ATF1P18846 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms