Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 MEX3B-202ENST00000558133 4333 ntBASIC12.39□□□□□ -0.43
HIST1H1DP16402 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 HLA-DRB6-201ENST00000411500 1235 ntBASIC12.39□□□□□ -0.43
HIST1H1DP16402 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 AC093726.1-201ENST00000608064 963 ntBASIC12.39□□□□□ -0.43
HIST1H1DP16402 AC005252.2-201ENST00000624630 1141 ntBASIC12.39□□□□□ -0.43
HIST1H1DP16402 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 AC020910.5-201ENST00000623668 1865 ntBASIC12.39□□□□□ -0.43
HIST1H1DP16402 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H1DP16402 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H1DP16402 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 ACKR1-201ENST00000368121 1240 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 USP17L6P-201ENST00000382470 1197 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 AC055876.3-201ENST00000431496 288 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 AC245100.3-201ENST00000441281 285 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 PUDPP3-201ENST00000445368 636 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 AL512638.1-201ENST00000457493 794 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 CD81-207ENST00000481687 890 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 MESTP3-201ENST00000503460 968 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 AC092552.1-201ENST00000547243 906 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 AC027237.1-201ENST00000560942 655 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 AC138649.4-201ENST00000612222 287 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.38□□□□□ -0.43
HIST1H1DP16402 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HIST1H1DP16402 HNRNPA1P48-201ENST00000562726 1377 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 AL022313.4-201ENST00000562756 2046 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 AL365181.3-201ENST00000605886 3222 ntBASIC12.38□□□□□ -0.43
HIST1H1DP16402 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms