Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.3■□□□□ 0.04
RARAP10276 AL157996.1-201ENST00000624684 2299 ntBASIC15.3■□□□□ 0.04
RARAP10276 RHOXF1P1-202ENST00000635473 501 ntBASIC15.3■□□□□ 0.04
RARAP10276 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.3■□□□□ 0.04
RARAP10276 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RARAP10276 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RARAP10276 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RARAP10276 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 AGAP10P-201ENST00000454844 2418 ntBASIC15.29■□□□□ 0.04
RARAP10276 FAM90A12P-201ENST00000519497 2375 ntBASIC15.29■□□□□ 0.04
RARAP10276 FAM90A24P-201ENST00000520792 2369 ntBASIC15.29■□□□□ 0.04
RARAP10276 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RARAP10276 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.29■□□□□ 0.04
RARAP10276 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RARAP10276 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RARAP10276 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RARAP10276 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RARAP10276 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 AHCYP2-201ENST00000430630 1300 ntBASIC15.29■□□□□ 0.04
RARAP10276 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 AL136309.1-201ENST00000403917 691 ntBASIC15.29■□□□□ 0.04
RARAP10276 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.29■□□□□ 0.04
RARAP10276 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.29■□□□□ 0.04
RARAP10276 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.29■□□□□ 0.04
RARAP10276 RPL7P3-201ENST00000441388 714 ntBASIC15.29■□□□□ 0.04
RARAP10276 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.29■□□□□ 0.04
RARAP10276 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.29■□□□□ 0.04
RARAP10276 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.29■□□□□ 0.04
RARAP10276 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.29■□□□□ 0.04
RARAP10276 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RARAP10276 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.29■□□□□ 0.04
RARAP10276 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.29■□□□□ 0.04
RARAP10276 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.29■□□□□ 0.04
RARAP10276 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.29■□□□□ 0.04
RARAP10276 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.29■□□□□ 0.04
RARAP10276 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RARAP10276 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.29■□□□□ 0.04
RARAP10276 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.29■□□□□ 0.04
RARAP10276 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RARAP10276 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.28■□□□□ 0.04
RARAP10276 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.28■□□□□ 0.04
RARAP10276 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RARAP10276 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.28■□□□□ 0.04
RARAP10276 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RARAP10276 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RARAP10276 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RARAP10276 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms