Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AP000593.2-201ENST00000542775 1433 ntBASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AC005252.3-201ENST00000623855 2258 ntBASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 Z97180.1-201ENST00000445173 988 ntBASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AL133466.1-201ENST00000447582 150 ntBASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 TUBB8P8-201ENST00000458717 1058 ntBASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AC117500.1-201ENST00000497352 755 ntBASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AC105148.1-201ENST00000604961 409 ntBASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AL136301.1-201ENST00000615830 422 ntBASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.19□□□□□ -0.14
CCNYL3P0C7X3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AL157414.3-201ENST00000624276 1954 ntBASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 HSFY1P1-201ENST00000423928 1178 ntBASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 NKAIN1P1-201ENST00000435754 582 ntBASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AC007041.1-201ENST00000438989 1155 ntBASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AP003171.2-201ENST00000528208 925 ntBASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 RHOQP1-201ENST00000555758 579 ntBASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AC004466.1-201ENST00000599515 1080 ntBASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AC135178.5-201ENST00000602597 674 ntBASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AC091544.8-201ENST00000619490 361 ntBASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AC027281.2-201ENST00000623856 713 ntBASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
CCNYL3P0C7X3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms