Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 SLC7A15P-201ENST00000424028 1363 ntBASIC13.26□□□□□ -0.29
HMGN1P05114 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGN1P05114 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGN1P05114 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGN1P05114 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.26□□□□□ -0.29
HMGN1P05114 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HMGN1P05114 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.26□□□□□ -0.29
HMGN1P05114 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGN1P05114 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.26□□□□□ -0.29
HMGN1P05114 AC092552.1-201ENST00000547243 906 ntBASIC13.26□□□□□ -0.29
HMGN1P05114 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.26□□□□□ -0.29
HMGN1P05114 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.26□□□□□ -0.29
HMGN1P05114 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.26□□□□□ -0.29
HMGN1P05114 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGN1P05114 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.26□□□□□ -0.29
HMGN1P05114 AC004466.1-201ENST00000599515 1080 ntBASIC13.26□□□□□ -0.29
HMGN1P05114 AC138696.2-201ENST00000607376 223 ntBASIC13.26□□□□□ -0.29
HMGN1P05114 AC004790.1-201ENST00000612686 536 ntBASIC13.26□□□□□ -0.29
HMGN1P05114 MIR8072-201ENST00000614241 80 ntBASIC13.26□□□□□ -0.29
HMGN1P05114 AL691403.2-201ENST00000618460 490 ntBASIC13.26□□□□□ -0.29
HMGN1P05114 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.26□□□□□ -0.29
HMGN1P05114 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
HMGN1P05114 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 PPT1-213ENST00000641319 2388 ntBASIC13.25□□□□□ -0.29
HMGN1P05114 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HMGN1P05114 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HMGN1P05114 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HMGN1P05114 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HMGN1P05114 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.25□□□□□ -0.29
HMGN1P05114 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HMGN1P05114 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.25□□□□□ -0.29
HMGN1P05114 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.25□□□□□ -0.29
HMGN1P05114 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HMGN1P05114 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HMGN1P05114 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HMGN1P05114 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 MIR1233-2-201ENST00000408138 82 ntBASIC13.25□□□□□ -0.29
HMGN1P05114 MIR1233-1-201ENST00000408722 82 ntBASIC13.25□□□□□ -0.29
HMGN1P05114 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.25□□□□□ -0.29
HMGN1P05114 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 MESTP3-201ENST00000503460 968 ntBASIC13.25□□□□□ -0.29
HMGN1P05114 ALG3P1-201ENST00000508806 1114 ntBASIC13.25□□□□□ -0.29
HMGN1P05114 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.25□□□□□ -0.29
HMGN1P05114 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.25□□□□□ -0.29
HMGN1P05114 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HMGN1P05114 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.25□□□□□ -0.29
HMGN1P05114 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.25□□□□□ -0.29
HMGN1P05114 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.25□□□□□ -0.29
HMGN1P05114 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
HMGN1P05114 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.25□□□□□ -0.29
HMGN1P05114 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HMGN1P05114 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HMGN1P05114 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 FAM90A12P-201ENST00000519497 2375 ntBASIC13.24□□□□□ -0.29
HMGN1P05114 FAM90A24P-201ENST00000520792 2369 ntBASIC13.24□□□□□ -0.29
HMGN1P05114 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.24□□□□□ -0.29
HMGN1P05114 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.24□□□□□ -0.29
HMGN1P05114 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HMGN1P05114 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms