Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 PYY2-201ENST00000315776 282 ntBASIC15.66■□□□□ 0.1
CHRNA1P02708 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA1P02708 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA1P02708 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.66■□□□□ 0.1
CHRNA1P02708 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA1P02708 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.66■□□□□ 0.1
CHRNA1P02708 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA1P02708 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
CHRNA1P02708 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.66■□□□□ 0.1
CHRNA1P02708 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CHRNA1P02708 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA1P02708 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA1P02708 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CHRNA1P02708 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA1P02708 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA1P02708 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CHRNA1P02708 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.66■□□□□ 0.1
CHRNA1P02708 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CHRNA1P02708 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.66■□□□□ 0.1
CHRNA1P02708 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
CHRNA1P02708 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA1P02708 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CHRNA1P02708 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CHRNA1P02708 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA1P02708 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA1P02708 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA1P02708 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA1P02708 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA1P02708 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA1P02708 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CHRNA1P02708 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA1P02708 SCARNA12-201ENST00000459155 270 ntBASIC15.65■□□□□ 0.1
CHRNA1P02708 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CHRNA1P02708 LINC00634-202ENST00000505157 222 ntBASIC15.65■□□□□ 0.1
CHRNA1P02708 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNA1P02708 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.65■□□□□ 0.1
CHRNA1P02708 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 MIR5196-201ENST00000578146 115 ntBASIC15.65■□□□□ 0.1
CHRNA1P02708 AC140113.1-201ENST00000603467 169 ntBASIC15.65■□□□□ 0.1
CHRNA1P02708 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA1P02708 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA1P02708 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA1P02708 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA1P02708 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA1P02708 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA1P02708 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA1P02708 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CHRNA1P02708 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CHRNA1P02708 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
CHRNA1P02708 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
CHRNA1P02708 AC144831.1-201ENST00000573312 2656 ntBASIC15.64■□□□□ 0.09
CHRNA1P02708 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CHRNA1P02708 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CHRNA1P02708 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
CHRNA1P02708 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA1P02708 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.64■□□□□ 0.09
CHRNA1P02708 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA1P02708 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA1P02708 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA1P02708 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA1P02708 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA1P02708 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA1P02708 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA1P02708 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA1P02708 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.64■□□□□ 0.09
CHRNA1P02708 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA1P02708 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC15.64■□□□□ 0.09
CHRNA1P02708 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA1P02708 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA1P02708 RN7SL357P-201ENST00000581065 298 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms