Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC17.27■□□□□ 0.36
MBD4O95243 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.27■□□□□ 0.36
MBD4O95243 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD4O95243 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.27■□□□□ 0.36
MBD4O95243 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MBD4O95243 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.27■□□□□ 0.36
MBD4O95243 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.27■□□□□ 0.36
MBD4O95243 UPF3AP2-201ENST00000457924 1132 ntBASIC17.27■□□□□ 0.36
MBD4O95243 PFN2-206ENST00000461930 606 ntTSL 4 BASIC17.27■□□□□ 0.36
MBD4O95243 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.27■□□□□ 0.36
MBD4O95243 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MBD4O95243 RTN3P1-201ENST00000536295 711 ntBASIC17.27■□□□□ 0.36
MBD4O95243 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD4O95243 MIR4754-201ENST00000582477 89 ntBASIC17.27■□□□□ 0.36
MBD4O95243 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.27■□□□□ 0.36
MBD4O95243 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.27■□□□□ 0.36
MBD4O95243 AL109837.1-201ENST00000603272 613 ntBASIC17.27■□□□□ 0.36
MBD4O95243 AL353770.1-201ENST00000614915 403 ntBASIC17.27■□□□□ 0.36
MBD4O95243 AC068587.10-201ENST00000641210 219 ntBASIC17.27■□□□□ 0.36
MBD4O95243 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD4O95243 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD4O95243 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
MBD4O95243 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD4O95243 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD4O95243 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.27■□□□□ 0.35
MBD4O95243 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
MBD4O95243 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.27■□□□□ 0.35
MBD4O95243 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.27■□□□□ 0.35
MBD4O95243 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.27■□□□□ 0.35
MBD4O95243 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD4O95243 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
MBD4O95243 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD4O95243 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MBD4O95243 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MBD4O95243 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD4O95243 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.26■□□□□ 0.35
MBD4O95243 HSPA8P5-201ENST00000456928 2069 ntBASIC17.26■□□□□ 0.35
MBD4O95243 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD4O95243 AC007274.2-201ENST00000421675 662 ntBASIC17.26■□□□□ 0.35
MBD4O95243 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.26■□□□□ 0.35
MBD4O95243 POU5F1P2-201ENST00000521750 823 ntBASIC17.26■□□□□ 0.35
MBD4O95243 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD4O95243 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.26■□□□□ 0.35
MBD4O95243 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD4O95243 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.26■□□□□ 0.35
MBD4O95243 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MBD4O95243 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC17.26■□□□□ 0.35
MBD4O95243 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.26■□□□□ 0.35
MBD4O95243 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MBD4O95243 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
MBD4O95243 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.25■□□□□ 0.35
MBD4O95243 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MBD4O95243 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.25■□□□□ 0.35
MBD4O95243 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.25■□□□□ 0.35
MBD4O95243 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.25■□□□□ 0.35
MBD4O95243 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.25■□□□□ 0.35
MBD4O95243 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.25■□□□□ 0.35
MBD4O95243 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.25■□□□□ 0.35
MBD4O95243 RHOQP1-201ENST00000555758 579 ntBASIC17.25■□□□□ 0.35
MBD4O95243 AC242376.1-201ENST00000559033 726 ntBASIC17.25■□□□□ 0.35
MBD4O95243 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MBD4O95243 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.25■□□□□ 0.35
MBD4O95243 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
MBD4O95243 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD4O95243 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms