Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.31■□□□□ 0.04
OPHN1O60890 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
OPHN1O60890 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.31■□□□□ 0.04
OPHN1O60890 AC078819.1-201ENST00000547454 765 ntBASIC15.31■□□□□ 0.04
OPHN1O60890 AC012085.1-201ENST00000548270 765 ntBASIC15.31■□□□□ 0.04
OPHN1O60890 ACTG1P17-201ENST00000558391 1119 ntBASIC15.31■□□□□ 0.04
OPHN1O60890 AC079328.1-201ENST00000560358 952 ntBASIC15.31■□□□□ 0.04
OPHN1O60890 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.31■□□□□ 0.04
OPHN1O60890 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.31■□□□□ 0.04
OPHN1O60890 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.31■□□□□ 0.04
OPHN1O60890 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.31■□□□□ 0.04
OPHN1O60890 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.31■□□□□ 0.04
OPHN1O60890 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.31■□□□□ 0.04
OPHN1O60890 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.31■□□□□ 0.04
OPHN1O60890 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
OPHN1O60890 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.31■□□□□ 0.04
OPHN1O60890 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.31■□□□□ 0.04
OPHN1O60890 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.31■□□□□ 0.04
OPHN1O60890 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 SALL4P5-201ENST00000419001 1760 ntBASIC15.31■□□□□ 0.04
OPHN1O60890 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.31■□□□□ 0.04
OPHN1O60890 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.31■□□□□ 0.04
OPHN1O60890 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
OPHN1O60890 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 AGGF1P1-201ENST00000509500 2073 ntBASIC15.31■□□□□ 0.04
OPHN1O60890 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
OPHN1O60890 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
OPHN1O60890 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.3■□□□□ 0.04
OPHN1O60890 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
OPHN1O60890 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
OPHN1O60890 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
OPHN1O60890 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
OPHN1O60890 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 AL662890.1-201ENST00000396818 632 ntBASIC15.3■□□□□ 0.04
OPHN1O60890 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.3■□□□□ 0.04
OPHN1O60890 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.3■□□□□ 0.04
OPHN1O60890 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.3■□□□□ 0.04
OPHN1O60890 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.3■□□□□ 0.04
OPHN1O60890 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
OPHN1O60890 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 AC003102.2-201ENST00000589195 1469 ntBASIC15.3■□□□□ 0.04
OPHN1O60890 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
OPHN1O60890 AC005695.3-201ENST00000614522 232 ntBASIC15.3■□□□□ 0.04
OPHN1O60890 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.3■□□□□ 0.04
OPHN1O60890 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
OPHN1O60890 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
OPHN1O60890 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
OPHN1O60890 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.29■□□□□ 0.04
OPHN1O60890 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.29■□□□□ 0.04
OPHN1O60890 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
OPHN1O60890 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms