Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
KDELR3O43731 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
KDELR3O43731 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KDELR3O43731 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
KDELR3O43731 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.68□□□□□ -0.06
KDELR3O43731 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 HSPA7-201ENST00000445535 1927 ntBASIC14.68□□□□□ -0.06
KDELR3O43731 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 CCT8L1P-201ENST00000465400 1674 ntBASIC14.68□□□□□ -0.06
KDELR3O43731 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
KDELR3O43731 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
KDELR3O43731 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 ACTG1P2-201ENST00000415776 1125 ntBASIC14.68□□□□□ -0.06
KDELR3O43731 ACTG1P11-201ENST00000425411 1125 ntBASIC14.68□□□□□ -0.06
KDELR3O43731 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.68□□□□□ -0.06
KDELR3O43731 AL596276.2-201ENST00000447525 331 ntBASIC14.68□□□□□ -0.06
KDELR3O43731 AC022494.1-201ENST00000466044 728 ntBASIC14.68□□□□□ -0.06
KDELR3O43731 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.68□□□□□ -0.06
KDELR3O43731 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 AC090857.1-201ENST00000527400 390 ntBASIC14.68□□□□□ -0.06
KDELR3O43731 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.68□□□□□ -0.06
KDELR3O43731 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
KDELR3O43731 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.68□□□□□ -0.06
KDELR3O43731 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.68□□□□□ -0.06
KDELR3O43731 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.68□□□□□ -0.06
KDELR3O43731 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KDELR3O43731 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.68□□□□□ -0.06
KDELR3O43731 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 TUBB8P4-201ENST00000511806 1324 ntBASIC14.67□□□□□ -0.06
KDELR3O43731 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
KDELR3O43731 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.67□□□□□ -0.06
KDELR3O43731 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 LINC01165-201ENST00000445190 1623 ntBASIC14.67□□□□□ -0.06
KDELR3O43731 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.67□□□□□ -0.06
KDELR3O43731 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.67□□□□□ -0.06
KDELR3O43731 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.67□□□□□ -0.06
KDELR3O43731 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.67□□□□□ -0.06
KDELR3O43731 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.67□□□□□ -0.06
KDELR3O43731 RN7SL11P-201ENST00000471305 293 ntBASIC14.67□□□□□ -0.06
KDELR3O43731 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.67□□□□□ -0.06
KDELR3O43731 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.67□□□□□ -0.06
KDELR3O43731 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
KDELR3O43731 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
KDELR3O43731 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.67□□□□□ -0.06
KDELR3O43731 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.67□□□□□ -0.06
KDELR3O43731 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.67□□□□□ -0.06
KDELR3O43731 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KDELR3O43731 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KDELR3O43731 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.66□□□□□ -0.06
KDELR3O43731 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.66□□□□□ -0.06
KDELR3O43731 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KDELR3O43731 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.66□□□□□ -0.06
KDELR3O43731 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
KDELR3O43731 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.66□□□□□ -0.06
KDELR3O43731 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
KDELR3O43731 AL009178.2-201ENST00000597278 2719 ntBASIC14.66□□□□□ -0.06
KDELR3O43731 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.66□□□□□ -0.06
KDELR3O43731 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.66□□□□□ -0.06
KDELR3O43731 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms