Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A1O14983 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2A1O14983 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATP2A1O14983 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 KRT17P5-201ENST00000332088 839 ntBASIC16.59■□□□□ 0.25
ATP2A1O14983 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A1O14983 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2A1O14983 RN7SL81P-201ENST00000493781 261 ntBASIC16.59■□□□□ 0.25
ATP2A1O14983 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 AC005586.2-201ENST00000563946 837 ntBASIC16.59■□□□□ 0.25
ATP2A1O14983 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
ATP2A1O14983 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 AC021016.3-201ENST00000608367 477 ntBASIC16.59■□□□□ 0.25
ATP2A1O14983 RN7SL736P-201ENST00000613111 269 ntBASIC16.59■□□□□ 0.25
ATP2A1O14983 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A1O14983 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2A1O14983 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A1O14983 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A1O14983 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 TCAF2P1-201ENST00000291129 2421 ntBASIC16.59■□□□□ 0.25
ATP2A1O14983 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATP2A1O14983 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A1O14983 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATP2A1O14983 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A1O14983 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2A1O14983 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A1O14983 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A1O14983 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP2A1O14983 AL354702.1-201ENST00000442006 1960 ntBASIC16.58■□□□□ 0.25
ATP2A1O14983 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
ATP2A1O14983 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A1O14983 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP2A1O14983 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP2A1O14983 MYADML-201ENST00000474610 2147 ntBASIC16.58■□□□□ 0.25
ATP2A1O14983 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
ATP2A1O14983 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A1O14983 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP2A1O14983 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A1O14983 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.58■□□□□ 0.25
ATP2A1O14983 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A1O14983 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP2A1O14983 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATP2A1O14983 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP2A1O14983 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A1O14983 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP2A1O14983 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP2A1O14983 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.58■□□□□ 0.24
ATP2A1O14983 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ATP2A1O14983 AC140658.4-201ENST00000561990 352 ntBASIC16.58■□□□□ 0.24
ATP2A1O14983 RPL17P45-201ENST00000586289 509 ntBASIC16.58■□□□□ 0.24
ATP2A1O14983 AC007881.3-201ENST00000608897 607 ntBASIC16.58■□□□□ 0.24
ATP2A1O14983 AP001184.1-201ENST00000637936 376 ntBASIC16.58■□□□□ 0.24
ATP2A1O14983 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ATP2A1O14983 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 LAP3P2-201ENST00000454686 1454 ntBASIC16.58■□□□□ 0.24
ATP2A1O14983 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP2A1O14983 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP2A1O14983 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A1O14983 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP2A1O14983 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A1O14983 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP2A1O14983 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATP2A1O14983 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A1O14983 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 AC018529.2-202ENST00000611482 3087 ntBASIC16.57■□□□□ 0.24
ATP2A1O14983 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP2A1O14983 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ATP2A1O14983 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
ATP2A1O14983 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ATP2A1O14983 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP2A1O14983 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP2A1O14983 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A1O14983 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms