Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
APAF1O14727 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.07■□□□□ 0.64
APAF1O14727 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC19.07■□□□□ 0.64
APAF1O14727 LINC02486-201ENST00000604157 3000 ntBASIC19.07■□□□□ 0.64
APAF1O14727 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
APAF1O14727 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
APAF1O14727 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
APAF1O14727 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
APAF1O14727 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
APAF1O14727 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
APAF1O14727 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
APAF1O14727 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
APAF1O14727 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
APAF1O14727 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
APAF1O14727 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
APAF1O14727 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC19.07■□□□□ 0.64
APAF1O14727 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC19.06■□□□□ 0.64
APAF1O14727 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 TUBB8P4-201ENST00000511806 1324 ntBASIC19.06■□□□□ 0.64
APAF1O14727 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 AL157996.1-201ENST00000624684 2299 ntBASIC19.06■□□□□ 0.64
APAF1O14727 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
APAF1O14727 AC078875.1-201ENST00000431907 724 ntBASIC19.06■□□□□ 0.64
APAF1O14727 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.06■□□□□ 0.64
APAF1O14727 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC19.06■□□□□ 0.64
APAF1O14727 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.06■□□□□ 0.64
APAF1O14727 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.06■□□□□ 0.64
APAF1O14727 AC013355.1-201ENST00000562625 723 ntBASIC19.06■□□□□ 0.64
APAF1O14727 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.06■□□□□ 0.64
APAF1O14727 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.06■□□□□ 0.64
APAF1O14727 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.06■□□□□ 0.64
APAF1O14727 AC021016.3-201ENST00000608367 477 ntBASIC19.06■□□□□ 0.64
APAF1O14727 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.06■□□□□ 0.64
APAF1O14727 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC19.06■□□□□ 0.64
APAF1O14727 AC090643.2-201ENST00000623442 2029 ntBASIC19.06■□□□□ 0.64
APAF1O14727 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 DDC-213ENST00000617822 1809 ntTSL 3 BASIC19.06■□□□□ 0.64
APAF1O14727 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC19.06■□□□□ 0.64
APAF1O14727 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
APAF1O14727 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC19.06■□□□□ 0.64
APAF1O14727 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
APAF1O14727 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
APAF1O14727 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC19.05■□□□□ 0.64
APAF1O14727 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 TCAM1P-207ENST00000485295 1537 ntBASIC19.05■□□□□ 0.64
APAF1O14727 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC19.05■□□□□ 0.64
APAF1O14727 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC19.05■□□□□ 0.64
APAF1O14727 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 AC041040.2-201ENST00000622926 2899 ntBASIC19.05■□□□□ 0.64
APAF1O14727 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
APAF1O14727 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.05■□□□□ 0.64
APAF1O14727 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.05■□□□□ 0.64
APAF1O14727 MARK2P5-201ENST00000507649 634 ntBASIC19.05■□□□□ 0.64
APAF1O14727 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.05■□□□□ 0.64
APAF1O14727 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC19.05■□□□□ 0.64
APAF1O14727 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.05■□□□□ 0.64
APAF1O14727 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 AC243960.2-201ENST00000600996 747 ntBASIC19.05■□□□□ 0.64
APAF1O14727 AL132994.2-201ENST00000603120 687 ntBASIC19.05■□□□□ 0.64
APAF1O14727 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.05■□□□□ 0.64
APAF1O14727 MIR6799-201ENST00000620297 69 ntBASIC19.05■□□□□ 0.64
APAF1O14727 AC090386.2-201ENST00000623010 1039 ntBASIC19.05■□□□□ 0.64
APAF1O14727 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC19.05■□□□□ 0.64
APAF1O14727 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC19.05■□□□□ 0.64
APAF1O14727 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC19.05■□□□□ 0.64
APAF1O14727 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.05■□□□□ 0.64
APAF1O14727 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
APAF1O14727 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
APAF1O14727 AP002353.1-201ENST00000528257 1599 ntBASIC19.05■□□□□ 0.64
APAF1O14727 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
APAF1O14727 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms