Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 AC138701.2-201ENST00000553634 226 ntBASIC21.09■□□□□ 0.97
HFM1A2PYH4 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HFM1A2PYH4 AC027601.5-201ENST00000624065 2482 ntBASIC21.09■□□□□ 0.97
HFM1A2PYH4 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
HFM1A2PYH4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HFM1A2PYH4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HFM1A2PYH4 AL590824.1-201ENST00000403828 1349 ntBASIC21.09■□□□□ 0.97
HFM1A2PYH4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC21.08■□□□□ 0.97
HFM1A2PYH4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HFM1A2PYH4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 RCC2P1-201ENST00000452257 1476 ntBASIC21.08■□□□□ 0.97
HFM1A2PYH4 AC019109.1-201ENST00000401725 1874 ntBASIC21.08■□□□□ 0.97
HFM1A2PYH4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC21.08■□□□□ 0.97
HFM1A2PYH4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
HFM1A2PYH4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC21.08■□□□□ 0.97
HFM1A2PYH4 RPSAP31-201ENST00000416648 895 ntBASIC21.08■□□□□ 0.97
HFM1A2PYH4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 EEF1DP2-201ENST00000433698 843 ntBASIC21.08■□□□□ 0.97
HFM1A2PYH4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC21.08■□□□□ 0.97
HFM1A2PYH4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC21.08■□□□□ 0.97
HFM1A2PYH4 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
HFM1A2PYH4 MIR3147-201ENST00000577811 66 ntBASIC21.08■□□□□ 0.97
HFM1A2PYH4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
HFM1A2PYH4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
HFM1A2PYH4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HFM1A2PYH4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
HFM1A2PYH4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
HFM1A2PYH4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC21.08■□□□□ 0.96
HFM1A2PYH4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
HFM1A2PYH4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HFM1A2PYH4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HFM1A2PYH4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 AC018638.5-201ENST00000450885 754 ntBASIC21.07■□□□□ 0.96
HFM1A2PYH4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 AC007952.4-201ENST00000573866 637 ntBASIC21.07■□□□□ 0.96
HFM1A2PYH4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HFM1A2PYH4 GOLGA8EP-201ENST00000530246 1959 ntBASIC21.07■□□□□ 0.96
HFM1A2PYH4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC21.07■□□□□ 0.96
HFM1A2PYH4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 HLA-DMA-203ENST00000395305 777 ntBASIC21.06■□□□□ 0.96
HFM1A2PYH4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 DNM1P30-201ENST00000563586 452 ntBASIC21.06■□□□□ 0.96
HFM1A2PYH4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC21.06■□□□□ 0.96
HFM1A2PYH4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HFM1A2PYH4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms