Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 AC073413.1-201ENST00000603927 732 ntBASIC14.83□□□□□ -0.04
CCDC78A2IDD5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 AC002472.3-201ENST00000640124 621 ntBASIC14.83□□□□□ -0.04
CCDC78A2IDD5 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC78A2IDD5 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 AC139712.1-201ENST00000378256 1875 ntBASIC14.82□□□□□ -0.04
CCDC78A2IDD5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 AC004945.1-201ENST00000416738 983 ntBASIC14.82□□□□□ -0.04
CCDC78A2IDD5 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 U91328.1-201ENST00000437528 223 ntBASIC14.82□□□□□ -0.04
CCDC78A2IDD5 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 COX5BP1-201ENST00000507622 393 ntBASIC14.82□□□□□ -0.04
CCDC78A2IDD5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 AL031595.1-201ENST00000623969 4709 ntBASIC14.82□□□□□ -0.04
CCDC78A2IDD5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC78A2IDD5 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms