Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DDX49Q9Y6V7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 AL138799.1-201ENST00000448213 1675 ntBASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 AC016397.2-201ENST00000624848 1985 ntBASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 AC099548.2-209ENST00000480264 625 ntBASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 AC022447.6-201ENST00000515522 438 ntBASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 MIR6787-201ENST00000616675 61 ntBASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 TUBB1P2-201ENST00000422712 1306 ntBASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 TUBB1P1-201ENST00000503144 1300 ntBASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DDX49Q9Y6V7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AL354702.1-201ENST00000442006 1960 ntBASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 FAM21FP-201ENST00000426241 1131 ntBASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AC025279.2-201ENST00000569730 653 ntBASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AC093813.1-201ENST00000605066 256 ntBASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AL645728.2-202ENST00000641679 227 ntBASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 AL138709.1-201ENST00000614840 1693 ntBASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX49Q9Y6V7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX49Q9Y6V7 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms