Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 ACTG1P17-201ENST00000558391 1119 ntBASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 AC013355.1-201ENST00000562625 723 ntBASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 MIR6720-201ENST00000611664 98 ntBASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 AC068587.8-201ENST00000641239 219 ntBASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 AC090505.1-201ENST00000430515 1834 ntBASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 AC104073.2-201ENST00000453737 312 ntBASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 Z98259.2-201ENST00000641583 609 ntBASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 RN7SL832P-201ENST00000607781 1756 ntBASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COL4A3BPQ9Y5P4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.27■□□□□ 0.2
COL4A3BPQ9Y5P4 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms