Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SATB2Q9UPW6 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.39□□□□□ -0.11
SATB2Q9UPW6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AL139385.1-201ENST00000611744 3272 ntBASIC14.38□□□□□ -0.11
SATB2Q9UPW6 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AC104073.2-201ENST00000453737 312 ntBASIC14.38□□□□□ -0.11
SATB2Q9UPW6 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 TUBB8P8-201ENST00000458717 1058 ntBASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AL161670.2-201ENST00000557650 1227 ntBASIC14.38□□□□□ -0.11
SATB2Q9UPW6 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 MIR4683-201ENST00000579659 81 ntBASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 ZBED1P1-201ENST00000502364 1930 ntBASIC14.38□□□□□ -0.11
SATB2Q9UPW6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 FKBP4P6-201ENST00000457486 1332 ntBASIC14.38□□□□□ -0.11
SATB2Q9UPW6 AC006480.2-201ENST00000609770 1337 ntBASIC14.38□□□□□ -0.11
SATB2Q9UPW6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SATB2Q9UPW6 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 CICP11-201ENST00000434745 2827 ntBASIC14.37□□□□□ -0.11
SATB2Q9UPW6 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 MESTP3-201ENST00000503460 968 ntBASIC14.37□□□□□ -0.11
SATB2Q9UPW6 MBP-227ENST00000526111 581 ntTSL 4 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.37□□□□□ -0.11
SATB2Q9UPW6 AL136301.1-201ENST00000615830 422 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms