Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 KRT18P36-201ENST00000411618 1276 ntBASIC15.49■□□□□ 0.07
CISHQ9NSE2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 AC090164.2-201ENST00000611487 516 ntBASIC15.49■□□□□ 0.07
CISHQ9NSE2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 AL022313.4-201ENST00000562756 2046 ntBASIC15.49■□□□□ 0.07
CISHQ9NSE2 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CISHQ9NSE2 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CISHQ9NSE2 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 AC004898.1-201ENST00000451057 766 ntBASIC15.48■□□□□ 0.07
CISHQ9NSE2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 AC044849.1-201ENST00000519737 1188 ntBASIC15.48■□□□□ 0.07
CISHQ9NSE2 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 PGAM1P5-201ENST00000548011 764 ntBASIC15.48■□□□□ 0.07
CISHQ9NSE2 SNORD3B-2-202ENST00000571722 791 ntBASIC15.48■□□□□ 0.07
CISHQ9NSE2 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 AL022328.3-201ENST00000607943 679 ntBASIC15.48■□□□□ 0.07
CISHQ9NSE2 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 MIR6869-201ENST00000619434 62 ntBASIC15.48■□□□□ 0.07
CISHQ9NSE2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.48■□□□□ 0.07
CISHQ9NSE2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CISHQ9NSE2 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CISHQ9NSE2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CISHQ9NSE2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CISHQ9NSE2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CISHQ9NSE2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.47■□□□□ 0.07
CISHQ9NSE2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CISHQ9NSE2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CISHQ9NSE2 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CISHQ9NSE2 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CISHQ9NSE2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.47■□□□□ 0.07
CISHQ9NSE2 LAP3P2-201ENST00000454686 1454 ntBASIC15.47■□□□□ 0.07
CISHQ9NSE2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CISHQ9NSE2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CISHQ9NSE2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms