Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 AC127383.1-201ENST00000444697 1800 ntBASIC17.49■□□□□ 0.39
RTN4Q9NQC3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC17.49■□□□□ 0.39
RTN4Q9NQC3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 HLA-A-201ENST00000376802 1334 ntBASIC17.48■□□□□ 0.39
RTN4Q9NQC3 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 PER1-211ENST00000581082 4521 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AP001171.1-201ENST00000436373 864 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 MTND2P31-201ENST00000512602 616 ntBASIC17.48■□□□□ 0.39
RTN4Q9NQC3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AC024267.1-201ENST00000582320 895 ntBASIC17.48■□□□□ 0.39
RTN4Q9NQC3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AC068137.2-201ENST00000605408 478 ntBASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AC099522.2-201ENST00000607001 744 ntBASIC17.48■□□□□ 0.39
RTN4Q9NQC3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTN4Q9NQC3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 AC009159.4-201ENST00000624606 2031 ntBASIC17.47■□□□□ 0.39
RTN4Q9NQC3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 MTND2P11-201ENST00000423638 648 ntBASIC17.47■□□□□ 0.39
RTN4Q9NQC3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 AC074386.1-202ENST00000463561 864 ntBASIC17.47■□□□□ 0.39
RTN4Q9NQC3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC17.47■□□□□ 0.39
RTN4Q9NQC3 RBBP4P3-201ENST00000619705 1283 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms