Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 AC113367.3-201ENST00000508316 1912 ntBASIC12.81□□□□□ -0.36
CDH20Q9HBT6 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 SHC1P1-201ENST00000425230 1745 ntBASIC12.81□□□□□ -0.36
CDH20Q9HBT6 AC015818.8-201ENST00000587907 1519 ntBASIC12.81□□□□□ -0.36
CDH20Q9HBT6 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 AC005912.2-201ENST00000619492 2400 ntBASIC12.81□□□□□ -0.36
CDH20Q9HBT6 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDH20Q9HBT6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 MIR326-201ENST00000362220 95 ntBASIC12.8□□□□□ -0.36
CDH20Q9HBT6 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 BRWD1P1-201ENST00000401091 371 ntBASIC12.8□□□□□ -0.36
CDH20Q9HBT6 BTBD6P1-201ENST00000412176 1267 ntBASIC12.8□□□□□ -0.36
CDH20Q9HBT6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 AC027601.3-201ENST00000622907 509 ntBASIC12.8□□□□□ -0.36
CDH20Q9HBT6 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 AC232323.1-201ENST00000540724 2099 ntBASIC12.8□□□□□ -0.36
CDH20Q9HBT6 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDH20Q9HBT6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms