Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 TUBB8P8-201ENST00000458717 1058 ntBASIC14.79□□□□□ -0.04
SEMA3CQ99985 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 AC005586.2-201ENST00000563946 837 ntBASIC14.79□□□□□ -0.04
SEMA3CQ99985 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 AC106872.11-201ENST00000605838 421 ntBASIC14.79□□□□□ -0.04
SEMA3CQ99985 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.79□□□□□ -0.04
SEMA3CQ99985 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SEMA3CQ99985 AL136379.1-201ENST00000623471 2642 ntBASIC14.79□□□□□ -0.04
SEMA3CQ99985 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.79□□□□□ -0.04
SEMA3CQ99985 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 SBF1P1-201ENST00000444527 5631 ntBASIC14.78□□□□□ -0.04
SEMA3CQ99985 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 POM121L10P-201ENST00000436994 1285 ntBASIC14.78□□□□□ -0.04
SEMA3CQ99985 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 KRT8P13-201ENST00000463294 1010 ntBASIC14.78□□□□□ -0.04
SEMA3CQ99985 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 AC007663.3-201ENST00000609632 465 ntBASIC14.78□□□□□ -0.04
SEMA3CQ99985 AL023803.2-201ENST00000620080 638 ntBASIC14.78□□□□□ -0.04
SEMA3CQ99985 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 HSPA7-201ENST00000445535 1927 ntBASIC14.78□□□□□ -0.04
SEMA3CQ99985 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SEMA3CQ99985 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SEMA3CQ99985 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
SEMA3CQ99985 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
SEMA3CQ99985 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEMA3CQ99985 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.77□□□□□ -0.04
SEMA3CQ99985 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SEMA3CQ99985 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEMA3CQ99985 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEMA3CQ99985 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SEMA3CQ99985 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SEMA3CQ99985 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SEMA3CQ99985 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.77□□□□□ -0.04
SEMA3CQ99985 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SEMA3CQ99985 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.77□□□□□ -0.04
SEMA3CQ99985 MBLAC2-202ENST00000514906 1936 ntBASIC14.77□□□□□ -0.04
SEMA3CQ99985 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEMA3CQ99985 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SEMA3CQ99985 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
SEMA3CQ99985 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEMA3CQ99985 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.77□□□□□ -0.05
SEMA3CQ99985 AL161932.2-201ENST00000435436 679 ntBASIC14.77□□□□□ -0.05
SEMA3CQ99985 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.77□□□□□ -0.05
SEMA3CQ99985 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.77□□□□□ -0.05
SEMA3CQ99985 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.77□□□□□ -0.05
SEMA3CQ99985 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SEMA3CQ99985 AL160314.3-201ENST00000556041 767 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms