Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 AC140658.4-201ENST00000561990 352 ntBASIC15.54■□□□□ 0.08
YME1L1Q96TA2 AC007952.4-201ENST00000573866 637 ntBASIC15.54■□□□□ 0.08
YME1L1Q96TA2 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 AC011471.3-201ENST00000623576 402 ntBASIC15.54■□□□□ 0.08
YME1L1Q96TA2 AL451007.2-201ENST00000632004 563 ntBASIC15.54■□□□□ 0.08
YME1L1Q96TA2 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
YME1L1Q96TA2 AC015688.4-201ENST00000580780 1647 ntBASIC15.54■□□□□ 0.08
YME1L1Q96TA2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 OR8T1P-201ENST00000421347 918 ntBASIC15.53■□□□□ 0.08
YME1L1Q96TA2 HCG27-204ENST00000424675 895 ntTSL 3 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AC092580.1-201ENST00000433998 658 ntBASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AC098934.1-203ENST00000442868 1262 ntBASIC15.53■□□□□ 0.08
YME1L1Q96TA2 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AC018638.5-201ENST00000450885 754 ntBASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.53■□□□□ 0.08
YME1L1Q96TA2 RN7SL396P-201ENST00000471086 295 ntBASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 RN7SL665P-201ENST00000578793 300 ntBASIC15.53■□□□□ 0.08
YME1L1Q96TA2 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AC007250.1-201ENST00000608934 338 ntBASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AC009145.4-201ENST00000625119 1294 ntBASIC15.53■□□□□ 0.08
YME1L1Q96TA2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.53■□□□□ 0.08
YME1L1Q96TA2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
YME1L1Q96TA2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms