Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 LINC01165-201ENST00000445190 1623 ntBASIC20.96■□□□□ 0.95
SIN3AQ96ST3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.96■□□□□ 0.95
SIN3AQ96ST3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 RN7SL774P-201ENST00000577467 290 ntBASIC20.96■□□□□ 0.95
SIN3AQ96ST3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 MEG3_2.1-201ENST00000611456 105 ntBASIC20.96■□□□□ 0.95
SIN3AQ96ST3 AC090386.2-201ENST00000623010 1039 ntBASIC20.96■□□□□ 0.95
SIN3AQ96ST3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 CCT8L1P-201ENST00000465400 1674 ntBASIC20.96■□□□□ 0.95
SIN3AQ96ST3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIN3AQ96ST3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SIN3AQ96ST3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 AC090643.2-201ENST00000623442 2029 ntBASIC20.95■□□□□ 0.94
SIN3AQ96ST3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 CYP46A4P-201ENST00000414953 267 ntBASIC20.95■□□□□ 0.94
SIN3AQ96ST3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 AC138649.2-201ENST00000615886 705 ntBASIC20.95■□□□□ 0.94
SIN3AQ96ST3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIN3AQ96ST3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 AC111170.3-201ENST00000624282 2464 ntBASIC20.94■□□□□ 0.94
SIN3AQ96ST3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 AC021016.3-201ENST00000608367 477 ntBASIC20.94■□□□□ 0.94
SIN3AQ96ST3 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SIN3AQ96ST3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms