Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 AC067931.2-201ENST00000623655 2003 ntBASIC17.79■□□□□ 0.44
NLRP3Q96P20 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
NLRP3Q96P20 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NLRP3Q96P20 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 AC095040.1-201ENST00000513286 675 ntBASIC17.78■□□□□ 0.44
NLRP3Q96P20 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 AC005357.2-202ENST00000590507 1060 ntBASIC17.78■□□□□ 0.44
NLRP3Q96P20 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 FO393412.1-201ENST00000619841 382 ntBASIC17.78■□□□□ 0.44
NLRP3Q96P20 AC138466.4-201ENST00000623965 852 ntBASIC17.78■□□□□ 0.44
NLRP3Q96P20 AC002044.2-201ENST00000624910 970 ntBASIC17.78■□□□□ 0.44
NLRP3Q96P20 LINC00244-201ENST00000625073 613 ntBASIC17.78■□□□□ 0.44
NLRP3Q96P20 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.78■□□□□ 0.44
NLRP3Q96P20 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NLRP3Q96P20 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.77■□□□□ 0.44
NLRP3Q96P20 AC021305.1-201ENST00000520656 1514 ntBASIC17.77■□□□□ 0.44
NLRP3Q96P20 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.77■□□□□ 0.44
NLRP3Q96P20 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.77■□□□□ 0.44
NLRP3Q96P20 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NLRP3Q96P20 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 TCAF2P1-201ENST00000291129 2421 ntBASIC17.77■□□□□ 0.44
NLRP3Q96P20 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.77■□□□□ 0.44
NLRP3Q96P20 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NLRP3Q96P20 MIR1227-201ENST00000408484 88 ntBASIC17.77■□□□□ 0.44
NLRP3Q96P20 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.77■□□□□ 0.44
NLRP3Q96P20 RNA5SP406-201ENST00000516106 112 ntBASIC17.77■□□□□ 0.44
NLRP3Q96P20 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.77■□□□□ 0.44
NLRP3Q96P20 AC104506.1-201ENST00000609247 429 ntBASIC17.77■□□□□ 0.44
NLRP3Q96P20 AC006158.1-201ENST00000610661 249 ntBASIC17.77■□□□□ 0.44
NLRP3Q96P20 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.77■□□□□ 0.44
NLRP3Q96P20 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NLRP3Q96P20 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms