Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 AL136982.5-201ENST00000605222 294 ntBASIC16.7■□□□□ 0.26
CDCA5Q96FF9 AC073869.4-201ENST00000620841 800 ntBASIC16.7■□□□□ 0.26
CDCA5Q96FF9 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CDCA5Q96FF9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 AC027612.2-202ENST00000445955 1199 ntBASIC16.69■□□□□ 0.26
CDCA5Q96FF9 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 BCRP4-201ENST00000506079 804 ntBASIC16.69■□□□□ 0.26
CDCA5Q96FF9 AC093300.1-201ENST00000510368 1201 ntBASIC16.69■□□□□ 0.26
CDCA5Q96FF9 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 RN7SL455P-201ENST00000580629 282 ntBASIC16.69■□□□□ 0.26
CDCA5Q96FF9 AC005777.1-201ENST00000588332 187 ntBASIC16.69■□□□□ 0.26
CDCA5Q96FF9 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDCA5Q96FF9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 KRT8P43-201ENST00000406052 1458 ntBASIC16.68■□□□□ 0.26
CDCA5Q96FF9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 IFNWP2-201ENST00000431203 580 ntBASIC16.68■□□□□ 0.26
CDCA5Q96FF9 CDCA4P4-201ENST00000435216 680 ntBASIC16.68■□□□□ 0.26
CDCA5Q96FF9 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 BAK1P2-201ENST00000532665 631 ntBASIC16.68■□□□□ 0.26
CDCA5Q96FF9 MED11-202ENST00000573708 802 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 FBXO36P1-201ENST00000579006 471 ntBASIC16.68■□□□□ 0.26
CDCA5Q96FF9 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 GGNBP1-204ENST00000613113 887 ntBASIC16.68■□□□□ 0.26
CDCA5Q96FF9 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDCA5Q96FF9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms