Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AP005018.1-201ENST00000525475 301 ntBASIC15.44■□□□□ 0.06
TRIM11Q96F44 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 AL136301.1-201ENST00000615830 422 ntBASIC15.44■□□□□ 0.06
TRIM11Q96F44 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 IGHV3-72-202ENST00000621503 303 ntBASIC15.44■□□□□ 0.06
TRIM11Q96F44 RHOXF1P1-202ENST00000635473 501 ntBASIC15.44■□□□□ 0.06
TRIM11Q96F44 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRIM11Q96F44 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM11Q96F44 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 SHC1P1-201ENST00000425230 1745 ntBASIC15.43■□□□□ 0.06
TRIM11Q96F44 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 AC092053.3-201ENST00000641308 4975 ntBASIC15.43■□□□□ 0.06
TRIM11Q96F44 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 MIR1202-201ENST00000408529 83 ntBASIC15.43■□□□□ 0.06
TRIM11Q96F44 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 C2orf69P2-201ENST00000562032 1123 ntBASIC15.43■□□□□ 0.06
TRIM11Q96F44 PPY2P-201ENST00000582808 702 ntBASIC15.43■□□□□ 0.06
TRIM11Q96F44 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 KRT8P4-201ENST00000509735 1454 ntBASIC15.43■□□□□ 0.06
TRIM11Q96F44 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM11Q96F44 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM11Q96F44 MBLAC2-202ENST00000514906 1936 ntBASIC15.43■□□□□ 0.06
TRIM11Q96F44 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 MIR326-201ENST00000362220 95 ntBASIC15.42■□□□□ 0.06
TRIM11Q96F44 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 COX5BP8-201ENST00000416911 349 ntBASIC15.42■□□□□ 0.06
TRIM11Q96F44 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 CHMP1AP1-201ENST00000445563 662 ntBASIC15.42■□□□□ 0.06
TRIM11Q96F44 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 AC087386.2-201ENST00000623212 4637 ntBASIC15.42■□□□□ 0.06
TRIM11Q96F44 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM11Q96F44 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM11Q96F44 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms