Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 KRT8P35-201ENST00000483942 1338 ntBASIC14.08□□□□□ -0.16
VPS33AQ96AX1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS33AQ96AX1 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 AL023775.1-201ENST00000454907 1746 ntBASIC14.07□□□□□ -0.16
VPS33AQ96AX1 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 AL442647.2-201ENST00000429864 857 ntBASIC14.07□□□□□ -0.16
VPS33AQ96AX1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 AC020910.5-201ENST00000623668 1865 ntBASIC14.07□□□□□ -0.16
VPS33AQ96AX1 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 SLC7A15P-201ENST00000424028 1363 ntBASIC14.07□□□□□ -0.16
VPS33AQ96AX1 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS33AQ96AX1 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 AC139712.1-201ENST00000378256 1875 ntBASIC14.06□□□□□ -0.16
VPS33AQ96AX1 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 ACTBP8-201ENST00000403258 1108 ntBASIC14.06□□□□□ -0.16
VPS33AQ96AX1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms