Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 SLC9A3P3-201ENST00000457608 2229 ntBASIC13□□□□□ -0.33
RFT1Q96AA3 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13□□□□□ -0.33
RFT1Q96AA3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13□□□□□ -0.33
RFT1Q96AA3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 LBH-203ENST00000404397 543 ntTSL 4 BASIC13□□□□□ -0.33
RFT1Q96AA3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13□□□□□ -0.33
RFT1Q96AA3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 HLA-K-203ENST00000430151 1046 ntBASIC13□□□□□ -0.33
RFT1Q96AA3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13□□□□□ -0.33
RFT1Q96AA3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 FAM86LP-201ENST00000478302 853 ntBASIC13□□□□□ -0.33
RFT1Q96AA3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 AC036164.1-201ENST00000570544 333 ntBASIC13□□□□□ -0.33
RFT1Q96AA3 AL049840.4-201ENST00000602422 811 ntBASIC13□□□□□ -0.33
RFT1Q96AA3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13□□□□□ -0.33
RFT1Q96AA3 AC093512.1-201ENST00000617969 520 ntBASIC13□□□□□ -0.33
RFT1Q96AA3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
RFT1Q96AA3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13□□□□□ -0.33
RFT1Q96AA3 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
RFT1Q96AA3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13□□□□□ -0.33
RFT1Q96AA3 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
RFT1Q96AA3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 AC022144.1-201ENST00000602255 1580 ntBASIC12.99□□□□□ -0.33
RFT1Q96AA3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 BTBD7P1-201ENST00000447253 1453 ntBASIC12.99□□□□□ -0.33
RFT1Q96AA3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 DRD5P1-201ENST00000456605 1438 ntBASIC12.99□□□□□ -0.33
RFT1Q96AA3 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 AL118506.1-201ENST00000601296 3082 ntBASIC12.99□□□□□ -0.33
RFT1Q96AA3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 VDAC1P7-201ENST00000462417 847 ntBASIC12.99□□□□□ -0.33
RFT1Q96AA3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 AL391069.4-201ENST00000609583 481 ntBASIC12.99□□□□□ -0.33
RFT1Q96AA3 AC004790.1-201ENST00000612686 536 ntBASIC12.99□□□□□ -0.33
RFT1Q96AA3 AC106028.4-201ENST00000614509 607 ntBASIC12.99□□□□□ -0.33
RFT1Q96AA3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.99□□□□□ -0.33
RFT1Q96AA3 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RFT1Q96AA3 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms