Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 UXT-AS1-201ENST00000590504 1525 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 Z98257.2-202ENST00000641138 1548 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 AC022400.8-201ENST00000623453 3599 ntBASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMIM11BQ8TCY0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 MARK2P9-201ENST00000430958 1727 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 SPDYE11-202ENST00000450699 704 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 SLC25A39P2-201ENST00000537614 270 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 IGHV3OR16-6-201ENST00000568775 360 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 SPDYE9P-201ENST00000570642 692 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 KRT18P8-201ENST00000581937 1246 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 AL049840.3-201ENST00000602669 611 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 AC064836.3-201ENST00000607928 673 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 SPDYE10P-202ENST00000612005 668 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 SPDYE8P-202ENST00000612377 668 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 MIR6069-201ENST00000620069 79 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 AC116407.3-201ENST00000623905 1129 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 AC107375.1-201ENST00000564464 2231 ntBASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMIM11BQ8TCY0 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
SMIM11BQ8TCY0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms