Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 KRT8P28-201ENST00000433288 1390 ntBASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 FRMPD2B-201ENST00000431305 1347 ntBASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 AC092978.1-202ENST00000637590 1327 ntBASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 AC026316.1-201ENST00000398900 414 ntBASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 RN7SL67P-201ENST00000492147 296 ntBASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 LINC01165-201ENST00000445190 1623 ntBASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SHKBP1Q8TBC3 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 CAP2P1-201ENST00000557743 1390 ntBASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 AC092135.3-201ENST00000624151 1846 ntBASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 AC107918.4-201ENST00000641966 3141 ntBASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 AL627231.1-201ENST00000394467 1125 ntBASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 RPL8P2-201ENST00000430538 502 ntBASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 AC073352.2-201ENST00000609385 439 ntBASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 MIR6727-201ENST00000620702 65 ntBASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SHKBP1Q8TBC3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
SHKBP1Q8TBC3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHKBP1Q8TBC3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.27■□□□□ 0.03
SHKBP1Q8TBC3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.27■□□□□ 0.03
SHKBP1Q8TBC3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.27■□□□□ 0.03
SHKBP1Q8TBC3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.27■□□□□ 0.03
SHKBP1Q8TBC3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHKBP1Q8TBC3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SHKBP1Q8TBC3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SHKBP1Q8TBC3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SHKBP1Q8TBC3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 AC015909.3-201ENST00000572855 1794 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 FAM90A2P-201ENST00000511144 1395 ntBASIC15.26■□□□□ 0.03
SHKBP1Q8TBC3 FAM90A25P-201ENST00000528404 1395 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms