Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 RET-205ENST00000615310 4337 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 AC092364.2-202ENST00000597012 1073 ntBASIC16.23■□□□□ 0.19
ZNF397Q8NF99 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 MIR8072-201ENST00000614241 80 ntBASIC16.23■□□□□ 0.19
ZNF397Q8NF99 AC007431.3-201ENST00000623221 587 ntBASIC16.23■□□□□ 0.19
ZNF397Q8NF99 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 FAM90A12P-201ENST00000519497 2375 ntBASIC16.23■□□□□ 0.19
ZNF397Q8NF99 FAM90A24P-201ENST00000520792 2369 ntBASIC16.23■□□□□ 0.19
ZNF397Q8NF99 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
ZNF397Q8NF99 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 AC090505.1-201ENST00000430515 1834 ntBASIC16.22■□□□□ 0.19
ZNF397Q8NF99 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 AL442647.2-201ENST00000429864 857 ntBASIC16.22■□□□□ 0.19
ZNF397Q8NF99 AC114812.1-204ENST00000449669 728 ntBASIC16.22■□□□□ 0.19
ZNF397Q8NF99 AC104596.2-201ENST00000512793 793 ntBASIC16.22■□□□□ 0.19
ZNF397Q8NF99 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 CHCHD2P3-201ENST00000603038 451 ntBASIC16.22■□□□□ 0.19
ZNF397Q8NF99 TMEM261P1-201ENST00000604899 340 ntBASIC16.22■□□□□ 0.19
ZNF397Q8NF99 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 SALL4P5-201ENST00000419001 1760 ntBASIC16.22■□□□□ 0.19
ZNF397Q8NF99 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 INE2-201ENST00000630399 1874 ntBASIC16.22■□□□□ 0.19
ZNF397Q8NF99 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.22■□□□□ 0.19
ZNF397Q8NF99 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF397Q8NF99 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF397Q8NF99 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
ZNF397Q8NF99 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF397Q8NF99 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF397Q8NF99 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF397Q8NF99 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC16.21■□□□□ 0.19
ZNF397Q8NF99 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
ZNF397Q8NF99 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
ZNF397Q8NF99 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms