Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 AC079178.1-201ENST00000420915 656 ntBASIC12.79□□□□□ -0.36
CPEB3Q8NE35 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 RPS2P32-201ENST00000439199 892 ntBASIC12.79□□□□□ -0.36
CPEB3Q8NE35 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 AL583810.1-201ENST00000553344 1045 ntBASIC12.79□□□□□ -0.36
CPEB3Q8NE35 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 EEF1DP1-201ENST00000585891 896 ntBASIC12.79□□□□□ -0.36
CPEB3Q8NE35 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 AC244157.2-201ENST00000616239 1006 ntBASIC12.79□□□□□ -0.36
CPEB3Q8NE35 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 LINC01230-201ENST00000625222 3017 ntBASIC12.79□□□□□ -0.36
CPEB3Q8NE35 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 AC011498.7-201ENST00000624986 2027 ntBASIC12.79□□□□□ -0.36
CPEB3Q8NE35 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
CPEB3Q8NE35 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 AC107918.4-201ENST00000641966 3141 ntBASIC12.78□□□□□ -0.36
CPEB3Q8NE35 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 MIR4783-201ENST00000580343 82 ntBASIC12.78□□□□□ -0.36
CPEB3Q8NE35 AC132192.2-201ENST00000596206 1147 ntBASIC12.78□□□□□ -0.36
CPEB3Q8NE35 AC009955.4-201ENST00000597192 544 ntBASIC12.78□□□□□ -0.36
CPEB3Q8NE35 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 MIR6074-201ENST00000612054 107 ntBASIC12.78□□□□□ -0.36
CPEB3Q8NE35 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 AC090505.1-201ENST00000430515 1834 ntBASIC12.78□□□□□ -0.36
CPEB3Q8NE35 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CPEB3Q8NE35 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms