Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 CICP20-201ENST00000443330 2801 ntBASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 PDIA3P1-201ENST00000471856 1510 ntBASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 AC234783.1-201ENST00000441761 496 ntBASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 CHMP1AP1-201ENST00000445563 662 ntBASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 HOMER2P2-201ENST00000451621 847 ntBASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 KLF2P4-201ENST00000451959 1225 ntBASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 KRT17P8-201ENST00000540749 863 ntBASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 AL358472.3-201ENST00000608147 415 ntBASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 KRT8P4-201ENST00000509735 1454 ntBASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
TTC9CQ8N5M4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 KRT8P28-201ENST00000433288 1390 ntBASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 AC010141.1-201ENST00000411585 623 ntBASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 CNN2P10-201ENST00000443067 918 ntBASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC11.56□□□□□ -0.56
TTC9CQ8N5M4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms