Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC19.86■□□□□ 0.77
UBR1Q8IWV7 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC19.86■□□□□ 0.77
UBR1Q8IWV7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.86■□□□□ 0.77
UBR1Q8IWV7 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
UBR1Q8IWV7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.86■□□□□ 0.77
UBR1Q8IWV7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.86■□□□□ 0.77
UBR1Q8IWV7 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC19.86■□□□□ 0.77
UBR1Q8IWV7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBR1Q8IWV7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 FTH1P18-201ENST00000412071 549 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 DNM1P46-202ENST00000415963 882 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 AC041040.1-201ENST00000425197 460 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 YY1P2-201ENST00000438766 948 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 ISL1-203ENST00000511384 981 ntTSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 AC087072.1-201ENST00000603727 421 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 HSD3BP1-201ENST00000286193 1111 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 CCL19-202ENST00000378800 414 ntTSL 2 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 KRT8P6-201ENST00000399259 1207 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 AC053503.3-201ENST00000448375 114 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 AC010202.1-201ENST00000551181 405 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 RN7SL134P-201ENST00000579756 303 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 AL512324.3-201ENST00000619383 882 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC19.85■□□□□ 0.77
UBR1Q8IWV7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBR1Q8IWV7 AL590824.1-201ENST00000403828 1349 ntBASIC19.84■□□□□ 0.77
UBR1Q8IWV7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 AC006486.2-201ENST00000624246 2199 ntBASIC19.84■□□□□ 0.77
UBR1Q8IWV7 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 HNRNPA3P12-201ENST00000437410 1063 ntBASIC19.84■□□□□ 0.77
UBR1Q8IWV7 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 RPS5-205ENST00000598495 800 ntTSL 3 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBR1Q8IWV7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 AC090820.1-201ENST00000519722 591 ntBASIC19.83■□□□□ 0.77
UBR1Q8IWV7 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC19.83■□□□□ 0.77
UBR1Q8IWV7 IFNL3P1-201ENST00000595082 501 ntBASIC19.83■□□□□ 0.77
UBR1Q8IWV7 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBR1Q8IWV7 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UBR1Q8IWV7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC19.83■□□□□ 0.76
UBR1Q8IWV7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms