Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 AC100827.2-201ENST00000563214 1194 ntBASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 MIR6720-201ENST00000611664 98 ntBASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 AL008718.2-201ENST00000609206 1313 ntBASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB11FIP4Q86YS3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 BTBD6P1-201ENST00000412176 1267 ntBASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 AC091271.1-201ENST00000611877 1162 ntBASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 AC090505.1-201ENST00000430515 1834 ntBASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 AC005840.4-201ENST00000541242 2494 ntBASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.11■□□□□ 0.33
RAB11FIP4Q86YS3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 SORD2P-201ENST00000558556 1069 ntBASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 AC104982.3-201ENST00000581995 514 ntBASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 Z98259.2-201ENST00000641583 609 ntBASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 AC136759.1-202ENST00000530858 2194 ntBASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RAB11FIP4Q86YS3 MBLAC2-202ENST00000514906 1936 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms