Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 KRT8P2-201ENST00000556193 944 ntBASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 SNORD3B-1-201ENST00000577988 758 ntBASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 AC073592.2-201ENST00000623062 780 ntBASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 AC019109.1-201ENST00000401725 1874 ntBASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
RTN4RL1Q86UN2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 RN7SL23P-201ENST00000484055 275 ntBASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 CHCHD2P2-201ENST00000503744 321 ntBASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AC022447.6-201ENST00000515522 438 ntBASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AL022344.2-201ENST00000568976 968 ntBASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AC244250.3-201ENST00000620749 366 ntBASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.39■□□□□ 0.05
RTN4RL1Q86UN2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 GRPEL2P1-201ENST00000453145 339 ntBASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 RN7SL767P-201ENST00000493013 295 ntBASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 PGAM1P12-201ENST00000505622 748 ntBASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 AL512310.5-201ENST00000551999 515 ntBASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 AC011247.3-201ENST00000603297 438 ntBASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 ST5-261ENST00000626808 1071 ntTSL 5 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 RPL13AP3-202ENST00000494676 1473 ntBASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RTN4RL1Q86UN2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms