Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AL031595.1-201ENST00000623969 4709 ntBASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 Z93015.1-201ENST00000451718 390 ntBASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 SORD2P-201ENST00000558556 1069 ntBASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 RN7SL560P-201ENST00000577943 264 ntBASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 AC009542.2-202ENST00000619004 1067 ntBASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 E2F3P2-201ENST00000447755 1422 ntBASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 AC131212.3-201ENST00000624087 4219 ntBASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SYNE3Q6ZMZ3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 AC100827.2-201ENST00000563214 1194 ntBASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SYNE3Q6ZMZ3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 RN7SL832P-201ENST00000607781 1756 ntBASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 AC152010.1-201ENST00000415779 2006 ntBASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 MTX1P1-201ENST00000440904 838 ntBASIC17.17■□□□□ 0.34
SYNE3Q6ZMZ3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms