Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.97□□□□□ -0.01
ALFQ53S48 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.97□□□□□ -0.01
ALFQ53S48 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.97□□□□□ -0.01
ALFQ53S48 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.97□□□□□ -0.01
ALFQ53S48 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.97□□□□□ -0.01
ALFQ53S48 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ALFQ53S48 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ALFQ53S48 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ALFQ53S48 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ALFQ53S48 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.96□□□□□ -0.01
ALFQ53S48 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ALFQ53S48 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.96□□□□□ -0.01
ALFQ53S48 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ALFQ53S48 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ALFQ53S48 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.96□□□□□ -0.01
ALFQ53S48 ST13P19-201ENST00000442505 1124 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.96□□□□□ -0.01
ALFQ53S48 BX284668.4-201ENST00000453917 508 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 AKR7A2P1-201ENST00000460134 915 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 HIST2H2BC-201ENST00000498492 580 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 MARK2P5-201ENST00000507649 634 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.96□□□□□ -0.01
ALFQ53S48 AC022217.1-201ENST00000521069 738 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.96□□□□□ -0.01
ALFQ53S48 AC003686.1-201ENST00000550956 1034 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 AC009779.1-201ENST00000551138 283 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 AC020914.3-201ENST00000594712 304 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.96□□□□□ -0.01
ALFQ53S48 AC138649.2-201ENST00000615886 705 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ALFQ53S48 AL136295.7-201ENST00000619226 1200 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 AC244452.3-201ENST00000636814 210 ntBASIC14.96□□□□□ -0.01
ALFQ53S48 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ALFQ53S48 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ALFQ53S48 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ALFQ53S48 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ALFQ53S48 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ALFQ53S48 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ALFQ53S48 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
ALFQ53S48 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ALFQ53S48 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ALFQ53S48 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
ALFQ53S48 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.95□□□□□ -0.02
ALFQ53S48 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
ALFQ53S48 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.95□□□□□ -0.02
ALFQ53S48 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.95□□□□□ -0.02
ALFQ53S48 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.95□□□□□ -0.02
ALFQ53S48 AL161932.2-201ENST00000435436 679 ntBASIC14.95□□□□□ -0.02
ALFQ53S48 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.95□□□□□ -0.02
ALFQ53S48 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.95□□□□□ -0.02
ALFQ53S48 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.95□□□□□ -0.02
ALFQ53S48 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 AL132994.2-201ENST00000603120 687 ntBASIC14.95□□□□□ -0.02
ALFQ53S48 AL645939.5-201ENST00000606834 243 ntBASIC14.95□□□□□ -0.02
ALFQ53S48 AC092299.1-201ENST00000632679 757 ntBASIC14.95□□□□□ -0.02
ALFQ53S48 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALFQ53S48 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.95□□□□□ -0.02
ALFQ53S48 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms