Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 AC104982.3-201ENST00000581995 514 ntBASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 AC090643.2-201ENST00000623442 2029 ntBASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTPN20Q4JDL3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 AC021723.1-201ENST00000486306 515 ntBASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 BNIP3P13-201ENST00000599968 566 ntBASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 AC133540.1-201ENST00000620845 1019 ntBASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PTPN20Q4JDL3 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 FAM90A7P-201ENST00000382628 1395 ntBASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 FAM90A23P-201ENST00000400136 1395 ntBASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 AC004899.1-201ENST00000424687 1714 ntBASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 MIR1908-201ENST00000410394 80 ntBASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 POM121L10P-201ENST00000436994 1285 ntBASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 AC008805.1-201ENST00000590892 364 ntBASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 AP000346.4-201ENST00000614827 381 ntBASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 AL023803.2-201ENST00000620080 638 ntBASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.27■□□□□ 0.04
PTPN20Q4JDL3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms