Protein–RNA interactions for Protein: Q08E93

FAM27E3, Protein FAM27E3, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27E3Q08E93 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 MYADML-201ENST00000474610 2147 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 AC104640.1-201ENST00000562617 2109 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 KRT17P5-201ENST00000332088 839 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 MIR557-201ENST00000385239 98 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 AL512430.1-201ENST00000392575 860 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 AC078991.1-201ENST00000437297 610 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 RN7SL181P-201ENST00000462921 277 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 RN7SL277P-201ENST00000481521 288 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 RN7SL555P-201ENST00000584742 339 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 AC138894.2-201ENST00000602838 371 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 AC092171.5-201ENST00000608012 942 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 AC021016.3-201ENST00000608367 477 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 COX6A1P2-201ENST00000620597 330 ntBASIC12.64□□□□□ -0.39
FAM27E3Q08E93 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
FAM27E3Q08E93 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 KRT8P31-201ENST00000504812 1408 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 FGD5P1-202ENST00000614866 2498 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 RPS9P1-201ENST00000419943 583 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 AC092580.1-201ENST00000433998 658 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 LDHBP1-201ENST00000455730 1119 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 AC114947.1-202ENST00000514136 344 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 AC005586.2-201ENST00000563946 837 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 MIR4522-201ENST00000584932 87 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 AC087045.2-201ENST00000606279 1003 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 MIR6727-201ENST00000620702 65 ntBASIC12.63□□□□□ -0.39
FAM27E3Q08E93 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
FAM27E3Q08E93 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms