Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL16A1Q07092 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.76■□□□□ 0.59
COL16A1Q07092 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL16A1Q07092 AL391005.1-201ENST00000623953 2435 ntBASIC18.76■□□□□ 0.59
COL16A1Q07092 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL16A1Q07092 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.76■□□□□ 0.59
COL16A1Q07092 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COL16A1Q07092 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.75■□□□□ 0.59
COL16A1Q07092 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL16A1Q07092 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL16A1Q07092 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.75■□□□□ 0.59
COL16A1Q07092 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL16A1Q07092 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC18.75■□□□□ 0.59
COL16A1Q07092 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 ACTG1P23-201ENST00000437653 1074 ntBASIC18.75■□□□□ 0.59
COL16A1Q07092 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC18.75■□□□□ 0.59
COL16A1Q07092 AC139143.1-201ENST00000441772 1207 ntBASIC18.75■□□□□ 0.59
COL16A1Q07092 KRT18P42-201ENST00000505048 1255 ntBASIC18.75■□□□□ 0.59
COL16A1Q07092 NEMF-210ENST00000556672 590 ntTSL 2 BASIC18.75■□□□□ 0.59
COL16A1Q07092 FAM223B-202ENST00000598177 713 ntBASIC18.75■□□□□ 0.59
COL16A1Q07092 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC18.75■□□□□ 0.59
COL16A1Q07092 MIR6819-201ENST00000622122 61 ntBASIC18.75■□□□□ 0.59
COL16A1Q07092 FAM223A-202ENST00000625204 713 ntBASIC18.75■□□□□ 0.59
COL16A1Q07092 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.75■□□□□ 0.59
COL16A1Q07092 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC18.75■□□□□ 0.59
COL16A1Q07092 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.75■□□□□ 0.59
COL16A1Q07092 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.75■□□□□ 0.59
COL16A1Q07092 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.75■□□□□ 0.59
COL16A1Q07092 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.75■□□□□ 0.59
COL16A1Q07092 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL16A1Q07092 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC18.74■□□□□ 0.59
COL16A1Q07092 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL16A1Q07092 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC18.74■□□□□ 0.59
COL16A1Q07092 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COL16A1Q07092 Z84721.1-201ENST00000438841 372 ntBASIC18.74■□□□□ 0.59
COL16A1Q07092 AC104115.1-201ENST00000484005 623 ntBASIC18.74■□□□□ 0.59
COL16A1Q07092 RN7SL47P-201ENST00000488710 299 ntBASIC18.74■□□□□ 0.59
COL16A1Q07092 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC18.74■□□□□ 0.59
COL16A1Q07092 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC18.74■□□□□ 0.59
COL16A1Q07092 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC18.74■□□□□ 0.59
COL16A1Q07092 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC18.74■□□□□ 0.59
COL16A1Q07092 AC015818.3-201ENST00000583797 589 ntBASIC18.74■□□□□ 0.59
COL16A1Q07092 AC239600.1-201ENST00000603201 462 ntBASIC18.74■□□□□ 0.59
COL16A1Q07092 AL109954.3-201ENST00000615088 558 ntBASIC18.74■□□□□ 0.59
COL16A1Q07092 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC18.74■□□□□ 0.59
COL16A1Q07092 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC18.74■□□□□ 0.59
COL16A1Q07092 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL16A1Q07092 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL16A1Q07092 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL16A1Q07092 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
COL16A1Q07092 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL16A1Q07092 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL16A1Q07092 AL139158.3-201ENST00000641212 1562 ntBASIC18.74■□□□□ 0.59
COL16A1Q07092 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL16A1Q07092 MKL1-204ENST00000402630 747 ntTSL 2 BASIC18.74■□□□□ 0.59
COL16A1Q07092 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COL16A1Q07092 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC18.74■□□□□ 0.59
COL16A1Q07092 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC18.74■□□□□ 0.59
COL16A1Q07092 RPL29P2-202ENST00000498671 657 ntBASIC18.74■□□□□ 0.59
COL16A1Q07092 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC18.74■□□□□ 0.59
COL16A1Q07092 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
COL16A1Q07092 AC068760.1-201ENST00000493579 1953 ntBASIC18.74■□□□□ 0.59
COL16A1Q07092 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COL16A1Q07092 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL16A1Q07092 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL16A1Q07092 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
COL16A1Q07092 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.73■□□□□ 0.59
COL16A1Q07092 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
COL16A1Q07092 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
COL16A1Q07092 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.73■□□□□ 0.59
COL16A1Q07092 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
COL16A1Q07092 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC18.73■□□□□ 0.59
COL16A1Q07092 RBMX2P5-201ENST00000424312 969 ntBASIC18.73■□□□□ 0.59
COL16A1Q07092 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC18.73■□□□□ 0.59
COL16A1Q07092 AACSP1-202ENST00000521412 1095 ntBASIC18.73■□□□□ 0.59
COL16A1Q07092 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.73■□□□□ 0.59
COL16A1Q07092 FOS-205ENST00000555242 629 ntTSL 2 BASIC18.73■□□□□ 0.59
COL16A1Q07092 MIR4309-201ENST00000582498 83 ntBASIC18.73■□□□□ 0.59
COL16A1Q07092 AC022382.1-201ENST00000602768 336 ntBASIC18.73■□□□□ 0.59
COL16A1Q07092 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL16A1Q07092 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC18.73■□□□□ 0.59
COL16A1Q07092 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms