Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABPAQ06546 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABPAQ06546 AP000356.3-201ENST00000382243 753 ntBASIC16.92■□□□□ 0.3
GABPAQ06546 MIR645-201ENST00000385283 94 ntBASIC16.92■□□□□ 0.3
GABPAQ06546 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GABPAQ06546 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.92■□□□□ 0.3
GABPAQ06546 RPSAP31-201ENST00000416648 895 ntBASIC16.92■□□□□ 0.3
GABPAQ06546 AC073869.2-201ENST00000417338 1026 ntBASIC16.92■□□□□ 0.3
GABPAQ06546 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GABPAQ06546 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.92■□□□□ 0.3
GABPAQ06546 ORAOV1P1-201ENST00000503108 395 ntBASIC16.92■□□□□ 0.3
GABPAQ06546 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.92■□□□□ 0.3
GABPAQ06546 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
GABPAQ06546 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.92■□□□□ 0.3
GABPAQ06546 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
GABPAQ06546 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.92■□□□□ 0.3
GABPAQ06546 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABPAQ06546 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.92■□□□□ 0.3
GABPAQ06546 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.92■□□□□ 0.3
GABPAQ06546 AP001184.1-201ENST00000637936 376 ntBASIC16.92■□□□□ 0.3
GABPAQ06546 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GABPAQ06546 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABPAQ06546 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABPAQ06546 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GABPAQ06546 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.92■□□□□ 0.3
GABPAQ06546 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.92■□□□□ 0.3
GABPAQ06546 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
GABPAQ06546 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.92■□□□□ 0.3
GABPAQ06546 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.92■□□□□ 0.3
GABPAQ06546 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GABPAQ06546 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.91■□□□□ 0.3
GABPAQ06546 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 DBET-201ENST00000630918 3363 ntBASIC16.91■□□□□ 0.3
GABPAQ06546 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.91■□□□□ 0.3
GABPAQ06546 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GABPAQ06546 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.91■□□□□ 0.3
GABPAQ06546 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GABPAQ06546 CHCHD2P9-201ENST00000461726 456 ntBASIC16.91■□□□□ 0.3
GABPAQ06546 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.91■□□□□ 0.3
GABPAQ06546 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
GABPAQ06546 DNM1P30-201ENST00000563586 452 ntBASIC16.91■□□□□ 0.3
GABPAQ06546 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.91■□□□□ 0.3
GABPAQ06546 AC007881.3-201ENST00000608897 607 ntBASIC16.91■□□□□ 0.3
GABPAQ06546 AC011491.1-203ENST00000637688 543 ntBASIC16.91■□□□□ 0.3
GABPAQ06546 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.91■□□□□ 0.3
GABPAQ06546 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.91■□□□□ 0.3
GABPAQ06546 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.91■□□□□ 0.3
GABPAQ06546 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GABPAQ06546 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
GABPAQ06546 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
GABPAQ06546 AL390755.1-201ENST00000623716 2027 ntBASIC16.91■□□□□ 0.3
GABPAQ06546 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.91■□□□□ 0.3
GABPAQ06546 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.91■□□□□ 0.3
GABPAQ06546 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GABPAQ06546 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
GABPAQ06546 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.9■□□□□ 0.3
GABPAQ06546 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GABPAQ06546 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.9■□□□□ 0.3
GABPAQ06546 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.9■□□□□ 0.3
GABPAQ06546 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.9■□□□□ 0.3
GABPAQ06546 AC104784.1-201ENST00000473096 294 ntBASIC16.9■□□□□ 0.3
GABPAQ06546 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.9■□□□□ 0.3
GABPAQ06546 RN7SL81P-201ENST00000493781 261 ntBASIC16.9■□□□□ 0.3
GABPAQ06546 ALG1L13P-202ENST00000519320 584 ntBASIC16.9■□□□□ 0.3
GABPAQ06546 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.9■□□□□ 0.3
GABPAQ06546 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.9■□□□□ 0.3
GABPAQ06546 AL031713.1-201ENST00000564813 661 ntBASIC16.9■□□□□ 0.3
GABPAQ06546 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 COX6A1P2-201ENST00000620597 330 ntBASIC16.9■□□□□ 0.3
GABPAQ06546 AC025262.2-201ENST00000623975 1056 ntBASIC16.9■□□□□ 0.3
GABPAQ06546 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.9■□□□□ 0.3
GABPAQ06546 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GABPAQ06546 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GABPAQ06546 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms