Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRNB3Q05901 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 PIN1P1-201ENST00000412108 996 ntBASIC13.88□□□□□ -0.19
CHRNB3Q05901 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 AC239800.4-201ENST00000603712 296 ntBASIC13.88□□□□□ -0.19
CHRNB3Q05901 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 AC015688.4-201ENST00000580780 1647 ntBASIC13.88□□□□□ -0.19
CHRNB3Q05901 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 DRD5P1-201ENST00000456605 1438 ntBASIC13.88□□□□□ -0.19
CHRNB3Q05901 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CHRNB3Q05901 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CHRNB3Q05901 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 MIR193BHG-211ENST00000641433 5365 ntBASIC13.87□□□□□ -0.19
CHRNB3Q05901 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.87□□□□□ -0.19
CHRNB3Q05901 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 TLE1P1-201ENST00000422965 589 ntBASIC13.87□□□□□ -0.19
CHRNB3Q05901 TSSK5P-201ENST00000423978 907 ntBASIC13.87□□□□□ -0.19
CHRNB3Q05901 AC007969.1-201ENST00000433675 447 ntBASIC13.87□□□□□ -0.19
CHRNB3Q05901 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRNB3Q05901 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 DUX4L47-201ENST00000566374 394 ntBASIC13.87□□□□□ -0.19
CHRNB3Q05901 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
CHRNB3Q05901 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms