Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL157996.1-201ENST00000624684 2299 ntBASIC14.09□□□□□ -0.15
HMGCS1Q01581 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HMGCS1Q01581 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HMGCS1Q01581 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCS1Q01581 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCS1Q01581 AC090643.2-201ENST00000623442 2029 ntBASIC14.08□□□□□ -0.15
HMGCS1Q01581 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCS1Q01581 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.08□□□□□ -0.15
HMGCS1Q01581 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.08□□□□□ -0.15
HMGCS1Q01581 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCS1Q01581 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
HMGCS1Q01581 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCS1Q01581 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCS1Q01581 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCS1Q01581 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HMGCS1Q01581 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
HMGCS1Q01581 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.08□□□□□ -0.15
HMGCS1Q01581 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 AC004945.1-201ENST00000416738 983 ntBASIC14.08□□□□□ -0.16
HMGCS1Q01581 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 GAPDHP21-201ENST00000450301 1010 ntBASIC14.08□□□□□ -0.16
HMGCS1Q01581 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 AC132938.2-201ENST00000579188 680 ntBASIC14.08□□□□□ -0.16
HMGCS1Q01581 AC008735.3-201ENST00000596646 500 ntBASIC14.08□□□□□ -0.16
HMGCS1Q01581 AL591163.1-201ENST00000641757 987 ntBASIC14.08□□□□□ -0.16
HMGCS1Q01581 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 AC111170.3-201ENST00000624282 2464 ntBASIC14.08□□□□□ -0.16
HMGCS1Q01581 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
HMGCS1Q01581 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGCS1Q01581 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 AC126335.2-201ENST00000623362 4637 ntBASIC14.07□□□□□ -0.16
HMGCS1Q01581 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGCS1Q01581 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGCS1Q01581 KRT17P7-201ENST00000451704 1104 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms