Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.39□□□□□ -0.11
CDKL1Q00532 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CDKL1Q00532 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 AC078819.1-201ENST00000547454 765 ntBASIC14.39□□□□□ -0.11
CDKL1Q00532 AC012085.1-201ENST00000548270 765 ntBASIC14.39□□□□□ -0.11
CDKL1Q00532 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.39□□□□□ -0.11
CDKL1Q00532 RN7SL713P-201ENST00000582127 302 ntBASIC14.39□□□□□ -0.11
CDKL1Q00532 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.39□□□□□ -0.11
CDKL1Q00532 AC244669.2-201ENST00000612320 853 ntBASIC14.39□□□□□ -0.11
CDKL1Q00532 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.39□□□□□ -0.11
CDKL1Q00532 AC138951.2-201ENST00000623455 1161 ntBASIC14.39□□□□□ -0.11
CDKL1Q00532 AC002472.3-201ENST00000640124 621 ntBASIC14.39□□□□□ -0.11
CDKL1Q00532 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CDKL1Q00532 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.39□□□□□ -0.11
CDKL1Q00532 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.39□□□□□ -0.11
CDKL1Q00532 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.39□□□□□ -0.11
CDKL1Q00532 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CDKL1Q00532 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDKL1Q00532 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDKL1Q00532 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDKL1Q00532 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.39□□□□□ -0.11
CDKL1Q00532 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.39□□□□□ -0.11
CDKL1Q00532 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.39□□□□□ -0.11
CDKL1Q00532 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDKL1Q00532 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDKL1Q00532 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.39□□□□□ -0.11
CDKL1Q00532 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CDKL1Q00532 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDKL1Q00532 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKL1Q00532 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.38□□□□□ -0.11
CDKL1Q00532 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.38□□□□□ -0.11
CDKL1Q00532 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKL1Q00532 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDKL1Q00532 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.38□□□□□ -0.11
CDKL1Q00532 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.38□□□□□ -0.11
CDKL1Q00532 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.38□□□□□ -0.11
CDKL1Q00532 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.38□□□□□ -0.11
CDKL1Q00532 SORD2P-201ENST00000558556 1069 ntBASIC14.38□□□□□ -0.11
CDKL1Q00532 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.38□□□□□ -0.11
CDKL1Q00532 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CDKL1Q00532 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKL1Q00532 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKL1Q00532 AC105233.6-201ENST00000642093 218 ntBASIC14.38□□□□□ -0.11
CDKL1Q00532 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CDKL1Q00532 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
CDKL1Q00532 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.38□□□□□ -0.11
CDKL1Q00532 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDKL1Q00532 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.38□□□□□ -0.11
CDKL1Q00532 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CDKL1Q00532 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDKL1Q00532 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDKL1Q00532 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDKL1Q00532 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms